Evidence map›Paper›PMID 20389019›Full record

ArticleThe Journal of clinical investigation2010

NOD1 contributes to mouse host defense against Helicobacter pylori via induction of type I IFN and activation of the ISGF3 signaling pathway.

Tomohiro Watanabe, Naoki Asano, Stefan Fichtner-Feigl, Peter L Gorelick, Yoshihisa Tsuji, Yuko Matsumoto, Tsutomu Chiba, Ivan J Fuss, Atsushi Kitani, Warren Strober

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed
24.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 252 citations in OpenAlex.

  1. Article
  2. Article
  3. Role of Nod-like Receptors inMicroorganisms · 2026
    Review
  4. Frontiers in immunology · 2026
    Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Pattern Recognition by NOD-Like Receptors.Advances in experimental medicine and biology · 2025
    Review
  15. Article
  16. Article
  17. NOD1: a metabolic modulator.Frontiers in endocrinology · 2024
    Review
  18. Reactive Oxygen Species andAntioxidants (Basel, Switzerland) · 2023
    Review
  19. Heliyon · 2023
    Review
  20. Review

82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Tomohiro WatanabeMucosal Immunity Section, Laboratory of Host Defenses, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, Maryland 20892, USA. tmhrwtnb@kuhp.kyoto-u.ac.jp
Naoki Asano
Stefan Fichtner-Feigl
Peter L Gorelick
Yoshihisa Tsuji
Yuko Matsumoto
Tsutomu Chiba
Ivan J Fuss
Atsushi Kitani
Warren Strober
Kyoto University · JPNational Institute of Allergy and Infectious Diseases · USNational Institutes of Health · US

Funding

Regulation Of Immune Responses In Humans and in Experimental AnimalsZIAAI000432 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI STROBER, WARREN · 2009 to 2025
$11.3M
Immunoregulatory Defects In Inflammatory Bowel DiseaseZIAAI000354 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI STROBER, WARREN · 2009 to 2025
$8.7M
6 · The paper itself

Abstract

Nucleotide-binding oligomerization domain 1 (NOD1) is an intracellular epithelial cell protein known to play a role in host defense at mucosal surfaces. Here we show that a ligand specific for NOD1, a peptide derived from peptidoglycan, initiates an unexpected signaling pathway in human epithelial cell lines that results in the production of type I IFN. Detailed analysis revealed the components of the signaling pathway. NOD1 binding to its ligand triggered activation of the serine-threonine kinase RICK, which was then able to bind TNF receptor-associated factor 3 (TRAF3). This in turn led to activation of TANK-binding kinase 1 (TBK1) and IkappaB kinase epsilon (IKKepsilon) and the subsequent activation of IFN regulatory factor 7 (IRF7). IRF7 induced IFN-beta production, which led to activation of a heterotrimeric transcription factor complex known as IFN-stimulated gene factor 3 (ISGF3) and the subsequent production of CXCL10 and additional type I IFN. In vivo studies showed that mice lacking the receptor for IFN-beta or subjected to gene silencing of the ISGF3 component Stat1 exhibited decreased CXCL10 responses and increased susceptibility to Helicobacter pylori infection, phenotypes observed in NOD1-deficient mice. These studies thus establish that NOD1 can activate the ISGF3 signaling pathway that is usually associated with protection against viral infection to provide mice with robust type I IFN-mediated protection from H. pylori and possibly other mucosal infections.

Indexed as

Signal TransductionAnimalsChemokinesFemaleHelicobacter InfectionsHelicobacter pyloriHumansInterferon-Stimulated Gene Factor 3Interferon-Stimulated Gene Factor 3, gamma SubunitInterferon Type ILigandsMaleMiceMice, Inbred C57BLNod1 Signaling Adaptor ProteinPeptidesChemokinesInterferon-Stimulated Gene Factor 3Interferon-Stimulated Gene Factor 3, gamma SubunitInterferon Type IIRF9 protein, humanLigandsNOD1 protein, humanNod1 protein, mouseNod1 Signaling Adaptor ProteinPeptides

Identifiers

PMID20389019
PMCPMC2860924
OpenAlexW2122364835

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.