Evidence map›Paper›PMID 20388773›Full record

ArticleCancer research2010

Sleeping beauty-mediated somatic mutagenesis implicates CSF1 in the formation of high-grade astrocytomas.

Aaron M Bender, Lara S Collier, Fausto J Rodriguez, Christina Tieu, Jon D Larson, Chandralekha Halder, Eric Mahlum, Thomas M Kollmeyer, Keiko Akagi, Gobinda Sarkar and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 61 citations in OpenAlex.

  1. Review
  2. Translational Models in Glioma Immunotherapy Research.Current oncology (Toronto, Ont.) · 2023
    Review
  3. Review
  4. Review
  5. IL-10 in glioma.British journal of cancer · 2021
    Review
  6. Article
  7. Review
  8. Review
  9. Review
  10. Pre-clinical tumor models of primary brain tumors: Challenges and opportunities.Biochimica et biophysica acta. Reviews on cancer · 2021
    Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Immunological Evasion in Glioblastoma.BioMed research international · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Aaron M BenderDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, USA.
Lara S Collier
Fausto J Rodriguez
Christina Tieu
Jon D Larson
Chandralekha Halder
Eric Mahlum
Thomas M Kollmeyer
Keiko Akagi
Gobinda Sarkar
David A Largaespada
Robert B Jenkins
Mayo Clinic · USNational Cancer Institute · USThe Ohio State University · USUniversity of Minnesota · USUniversity of Wisconsin–Madison · US

Funding

TRAINING GRANT IN MICROBIOLOGY/CANCER RESEARCHT32CA009138 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI Scott M. Dehm · 1985 to 2026
$11.3M
Sleeping Beauty for uncovering cancer genes in miceR01CA113636 · NCI · UNIVERSITY OF MINNESOTA · PI LARGAESPADA, DAVID ANDREW · 2006 to 2016
$2.5M
Sleeping Beauty for cancer gene discoveryK01CA122183 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI COLLIER, LARA S · 2006 to 2010
$729k
NCI NIH HHS K01 CA122183NCI NIH HHS K01CA122183NCI NIH HHS R01 CA113636NCI NIH HHS R01CA113636NCI NIH HHS T32 CA009138
6 · The paper itself

Abstract

The Sleeping Beauty (SB) transposon system has been used as an insertional mutagenesis tool to identify novel cancer genes. To identify glioma-associated genes, we evaluated tumor formation in the brain tissue from 117 transgenic mice that had undergone constitutive SB-mediated transposition. Upon analysis, 21 samples (18%) contained neoplastic tissue with features of high-grade astrocytomas. These tumors expressed glial markers and were histologically similar to human glioma. Genomic DNA from SB-induced astrocytoma tissue was extracted and transposon insertion sites were identified. Insertions in the growth factor gene Csf1 were found in 13 of the 21 tumors (62%), clustered in introns 5 and 8. Using reverse transcription-PCR, we documented increased Csf1 RNAs in tumor versus adjacent normal tissue, with the identification of transposon-terminated Csf1 mRNAs in astrocytomas with SB insertions in intron 8. Analysis of human glioblastomas revealed increased levels of Csf1 RNA and protein. Together, these results indicate that SB-insertional mutagenesis can identify high-grade astrocytoma-associated genes and they imply an important role for CSF1 in the development of these tumors.

Indexed as

DNA Transposable ElementsAnimalsAstrocytomaBrain NeoplasmsMacrophage Colony-Stimulating FactorMiceMice, TransgenicMutagenesis, InsertionalReceptor, Macrophage Colony-Stimulating FactorRNA, MessengerTransposasesDNA Transposable ElementsMacrophage Colony-Stimulating FactorReceptor, Macrophage Colony-Stimulating FactorRNA, MessengerTransposases

Identifiers

PMID20388773
PMCPMC2862088
OpenAlexW2022880602

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.