Evidence map›Paper›PMID 20387845›Full record

ArticleThe Journal of organic chemistry2010

Synthesis and characterization of BODIPY-alpha-tocopherol: a fluorescent form of vitamin E.

Ryan West, Candace Panagabko, Jeffrey Atkinson

Abstract read
In one paragraph

Article in The Journal of organic chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 52 citations in OpenAlex.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ryan WestDepartment of Chemistry and Centre for Biotechnology, Brock University, St. Catharines, Ontario, Canada L2S 3A1.
Candace Panagabko
Jeffrey Atkinson
Brock University · CA

Funding

Functions of Tocopherol Transfer TroteinR01DK067494 · NIDDK · CORNELL UNIVERSITY ITHACA · PI MANOR, DANNY · 2004 to 2012
$2.8M
NIDDK NIH HHS DK067494NIDDK NIH HHS R01 DK067494
6 · The paper itself

Abstract

Fluorescent nitrobenzoxadiazole analogues of alpha-tocopherol (NBD-alpha-Tocs; lambda(ex) = 468 nm, lambda(em) = 527 nm) have been made previously to aid study of the intracellular location and transfer of vitamin E. However, these analogues are susceptible to photobleaching while under illumination for confocal microscopy as well as in in vitro FRET transfer assays. Here we report the synthesis of three fluorescent analogues of alpha-tocopherol incorporating the more robust dipyrrometheneboron difluoride (BODIPY) fluorophore. A BODIPY-linked chromanol should have no intervening polar functional groups that might interfere with binding to the hydrophobic binding site of the tocopherol transfer protein (alpha-TTP). A key step in bringing the two ring systems together was a metathesis reaction of vinyl chromanol and an alkenyl BODIPY. An o-tolyl containing second generation Grubbs catalyst was identified as the best catalyst for effecting the metathesis without detectable alkene isomerization, which when it occurred produced a mixture of chain lengths in the alkyl linker. C8-BODIPY-alpha-Toc 10c (lambda(ex) = 507 nm, lambda(em) = 511 nm, epsilon(507) = 83,000 M(-1) cm(-1)) having an eight-carbon chain between the chromanol and fluorophore, had the highest affinity for alpha-TTP (K(d) = 94 +/- 3 nM) and bound specifically as it could not be displaced with cholesterol.

Indexed as

alpha-TocopherolBinding SitesBoron CompoundsCarrier ProteinsCells, CulturedCholesterolChromansFluorescence Resonance Energy TransferFluorescent DyesHumansMolecular StructureTocopherolsVinyl Compounds2,2,5,7,8-pentamethyl-1-hydroxychroman4,4-difluoro-4-bora-3a,4a-diaza-s-indacenealpha-Tocopherolalpha-tocopherol transfer proteinBoron CompoundsCarrier ProteinsCholesterolChromansFluorescent DyesTocopherolsVinyl Compounds

Identifiers

PMID20387845
PMCPMC2891523
OpenAlexW1999030639

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.