Evidence map›Paper›PMID 20385601›Full record

ArticleNucleic acids research2010

Nucleolin binds to a subset of selenoprotein mRNAs and regulates their expression.

Angela C Miniard, Lisa M Middleton, Michael E Budiman, Carri A Gerber, Donna M Driscoll

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 75 citations in OpenAlex.

  1. Nucleolin Alterations and ROS Production Associate With Sensitivity of AML Cells to Venetoclax.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  2. Review
  3. Review
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  5. Article
  6. Review
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  8. Ribosome Fate during Decoding of UGA-Sec Codons.International journal of molecular sciences · 2021
    Review
  9. SECISBP2 is a novel prognostic predictor that regulates selenoproteins in diffuse large B-cell lymphoma.Laboratory investigation; a journal of technical methods and pathology · 2021
    Article
  10. Cancer Stem Cells and Nucleolin as Drivers of Carcinogenesis.Pharmaceuticals (Basel, Switzerland) · 2021
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Angela C MiniardDepartment of Cell Biology, Cleveland Clinic, Cleveland, OH 44195, USA.
Lisa M Middleton
Michael E Budiman
Carri A Gerber
Donna M Driscoll
Cleveland Clinic · USCase Western Reserve University · USThe Ohio State University · US

Funding

Regulation of Selenoprotein Synthesis by SECIS-binding ProteinsR01DK078591 · NIDDK · CLEVELAND CLINIC LERNER COM-CWRU · PI DRISCOLL, DONNA M · 2007 to 2014
$2.6M
An unexpected role for elF4a3 in regulating GPx1 selenoprotein expressionF32DK083154 · NIDDK · CLEVELAND CLINIC LERNER COM-CWRU · PI BUDIMAN, MICHAEL EVEREST · 2008 to 2010
$148k
NIDDK NIH HHS F32 DK083154NIDDK NIH HHS R01 DK078591
6 · The paper itself

Abstract

Selenium, an essential trace element, is incorporated into selenoproteins as selenocysteine (Sec), the 21st amino acid. In order to synthesize selenoproteins, a translational reprogramming event must occur since Sec is encoded by the UGA stop codon. In mammals, the recoding of UGA as Sec depends on the selenocysteine insertion sequence (SECIS) element, a stem-loop structure in the 3' untranslated region of the transcript. The SECIS acts as a platform for RNA-binding proteins, which mediate or regulate the recoding mechanism. Using UV crosslinking, we identified a 110 kDa protein, which binds with high affinity to SECIS elements from a subset of selenoprotein mRNAs. The crosslinking activity was purified by RNA affinity chromatography and identified as nucleolin by mass spectrometry analysis. In vitro binding assays showed that purified nucleolin discriminates among SECIS elements in the absence of other factors. Based on siRNA experiments, nucleolin is required for the optimal expression of certain selenoproteins. There was a good correlation between the affinity of nucleolin for a SECIS and its effect on selenoprotein expression. As selenoprotein transcript levels and localization did not change in siRNA-treated cells, our results suggest that nucleolin selectively enhances the expression of a subset of selenoproteins at the translational level.

Indexed as

3' Untranslated RegionsGene Expression RegulationAnimalsCell Line, TumorGlutathione PeroxidaseNucleolinPhospholipid Hydroperoxide Glutathione PeroxidasePhosphoproteinsRatsRNA-Binding ProteinsRNA, MessengerSelenoproteins3' Untranslated RegionsGlutathione PeroxidaseNucleolinPhospholipid Hydroperoxide Glutathione PeroxidasePhosphoproteinsRNA-Binding ProteinsRNA, MessengerSelenoproteins

Identifiers

PMID20385601
PMCPMC2919729
OpenAlexW2068836274

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.