Evidence map›Paper›PMID 20385087›Full record

ArticleMolecular cell2010

A competitive transcription factor binding mechanism determines the timing of late cell cycle-dependent gene expression.

Zoulfia Darieva, Anne Clancy, Richard Bulmer, Emma Williams, Aline Pic-Taylor, Brian A Morgan, Andrew D Sharrocks

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 66 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zoulfia DarievaFaculty of Life Sciences, University of Manchester, Michael Smith Building, Oxford Road, Manchester M139PT, UK.
Anne Clancy
Richard Bulmer
Emma Williams
Aline Pic-Taylor
Brian A Morgan
Andrew D Sharrocks
Newcastle University · GBUniversity of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E016073/1Cancer Research UKWellcome Trust
6 · The paper itself

Abstract

Transcriptional control is exerted by the antagonistic activities of activator and repressor proteins. In Saccharomyces cerevisiae, transcription factor complexes containing the MADS box protein Mcm1p are key regulators of cell cycle-dependent transcription at both the G2/M and M/G1 transitions. The homeodomain repressor protein Yox1p acts in a complex with Mcm1p to control the timing of gene expression. Here, we show that Yox1p interacts with Mcm1p through a motif located N terminally to its homeodomain. Yox1p functions as a transcriptional repressor by competing with the forkhead transcription activator protein Fkh2p for binding to Mcm1p through protein-protein interactions at promoters of a subset of Mcm1p-regulated genes. Importantly, this competition is not through binding the same DNA site that is commonly observed. Thus, this study describes a different mechanism for determining the timing of cell cycle-dependent gene expression that involves competition between short peptide motifs in repressor and activator proteins for interaction with a common binding partner.

Indexed as

Gene Expression Regulation, FungalAmino Acid SequenceAnimalsBase SequenceBinding SitesCell CycleCell Cycle ProteinsForkhead Transcription FactorsHomeodomain ProteinsMinichromosome Maintenance 1 ProteinMolecular Sequence DataPromoter Regions, GeneticProtein BindingRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCell Cycle ProteinsFkh2 protein, S cerevisiaeForkhead Transcription FactorsHomeodomain ProteinsMCM1 protein, S cerevisiaeMinichromosome Maintenance 1 ProteinRepressor ProteinsSaccharomyces cerevisiae ProteinsTranscription FactorsYox1 protein, S cerevisiae

Identifiers

PMID20385087
PMCPMC3566586
OpenAlexW2168670122

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.