Evidence map›Paper›PMID 20383335›Full record

ArticlePloS one2010

FAM5C contributes to aggressive periodontitis.

Flavia M Carvalho, Eduardo M B Tinoco, Kathleen Deeley, Poliana M Duarte, Marcelo Faveri, Marcelo R Marques, Adriana C Mendonça, Xiaojing Wang, Karen Cuenco, Renato Menezes and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Flavia M CarvalhoDepartment of Genetics, Institute of Biology, Federal University of Rio de Janeiro, Rio de Janeiro, Rio de Janeiro, Brazil.
Eduardo M B Tinoco
Kathleen Deeley
Poliana M Duarte
Marcelo Faveri
Marcelo R Marques
Adriana C Mendonça
Xiaojing Wang
Karen Cuenco
Renato Menezes
Gustavo P Garlet
Alexandre R Vieira
University of Pittsburgh · USGuarulhos University · BRUniversidade Estadual de Campinas (UNICAMP) · BRUniversidade Federal do Rio de Janeiro · BRUniversidade Unigranrio · BR

Funding

Clefts/Craniofacial Anomalies and Cancer SusceptibilityK99DE018413 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SILVA, RENATO MENEZES · 2008 to 2009
$202k
NIDCR NIH HHS K99 DE018413NIDCR NIH HHS K99-DE018413
6 · The paper itself

Abstract

Aggressive periodontitis is characterized by a rapid and severe periodontal destruction in young systemically healthy subjects. A greater prevalence is reported in Africans and African descendent groups than in Caucasians and Hispanics. We first fine mapped the interval 1q24.2 to 1q31.3 suggested as containing an aggressive periodontitis locus. Three hundred and eighty-nine subjects from 55 pedigrees were studied. Saliva samples were collected from all subjects, and DNA was extracted. Twenty-one single nucleotide polymorphisms were selected and analyzed by standard polymerase chain reaction using TaqMan chemistry. Non-parametric linkage and transmission distortion analyses were performed. Although linkage results were negative, statistically significant association between two markers, rs1935881 and rs1342913, in the FAM5C gene and aggressive periodontitis (p = 0.03) was found. Haplotype analysis showed an association between aggressive periodontitis and the haplotype A-G (rs1935881-rs1342913; p = 0.009). Sequence analysis of FAM5C coding regions did not disclose any mutations, but two variants in conserved intronic regions of FAM5C, rs57694932 and rs10494634, were found. However, these two variants are not associated with aggressive periodontitis. Secondly, we investigated the pattern of FAM5C expression in aggressive periodontitis lesions and its possible correlations with inflammatory/immunological factors and pathogens commonly associated with periodontal diseases. FAM5C mRNA expression was significantly higher in diseased versus healthy sites, and was found to be correlated to the IL-1beta, IL-17A, IL-4 and RANKL mRNA levels. No correlations were found between FAM5C levels and the presence and load of red complex periodontopathogens or Aggregatibacter actinomycetemcomitans. This study provides evidence that FAM5C contributes to aggressive periodontitis.

Indexed as

Aggressive PeriodontitisBacteriaChromosome MappingChromosomes, Human, Pair 1DNA-Binding ProteinsGenetic LinkageHumansPedigreePolymorphism, Single NucleotideRNA, MessengerSalivaBRINP3 protein, humanDNA-Binding ProteinsRNA, Messenger

Identifiers

PMID20383335
PMCPMC2850931
OpenAlexW2165599903

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.