Evidence map›Paper›PMID 20382984›Full record

ArticleAging2010

A two-tiered compensatory response to loss of DNA repair modulates aging and stress response pathways.

Øyvind Fensgård, Henok Kassahun, Izabela Bombik, Torbjørn Rognes, Jessica Margareta Lindvall, Hilde Nilsen

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Frontiers in aging · 2022
    Review
  3. Article
  4. The Base Excision Repair Pathway in the NematodeFrontiers in cell and developmental biology · 2020
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Comparative interactomics with Funcoup 2.0.Nucleic acids research · 2012
    Article
  17. Article
  18. Nucleotide Excision Repair in Caenorhabditis elegans.Molecular biology international · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Øyvind FensgårdUniversity of Oslo, The Biotechnology Centre, Blindern, Oslo, Norway.
Henok Kassahun
Izabela Bombik
Torbjørn Rognes
Jessica Margareta Lindvall
Hilde Nilsen
University of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activation of oxidative stress-responses and downregulation of insulin-like signaling (ILS) is seen in Nucleotide Excision Repair (NER) deficient segmental progeroid mice. Evidence suggests that this is a survival response to persistent transcription-blocking DNA damage, although the relevant lesions have not been identified. Here we show that loss of NTH-1, the only Base Excision Repair (BER) enzyme known to initiate repair of oxidative DNA damage inC. elegans, restores normal lifespan of the short-lived NER deficient xpa-1 mutant. Loss of NTH-1 leads to oxidative stress and global expression profile changes that involve upregulation of genes responding to endogenous stress and downregulation of ILS. A similar, but more extensive, transcriptomic shift is observed in the xpa-1 mutant whereas loss of both NTH-1 and XPA-1 elicits a different profile with downregulation of Aurora-B and Polo-like kinase 1 signaling networks as well as DNA repair and DNA damage response genes. The restoration of normal lifespan and absence oxidative stress responses in nth-1;xpa-1 indicate that BER contributes to generate transcription blocking lesions from oxidative DNA damage. Hence, our data strongly suggests that the DNA lesions relevant for aging are repair intermediates resulting from aberrant or attempted processing by BER of lesions normally repaired by NER.

Indexed as

DNA RepairGene Expression RegulationOxidative StressAgingAnimalsAurora Kinase BAurora KinasesCaenorhabditis elegansCaenorhabditis elegans ProteinsCell Cycle ProteinsDNA GlycosylasesEndonucleasesInsulinInsulin-Like Growth Factor IPhenotypePolo-Like Kinase 1Aurkb protein, mouseAurora Kinase BAurora KinasesCaenorhabditis elegans ProteinsCell Cycle ProteinsDNA GlycosylasesEndonucleasesInsulinInsulin-Like Growth Factor INTH-1 protein, C elegansPolo-Like Kinase 1Protein Serine-Threonine KinasesProto-Oncogene ProteinsXeroderma Pigmentosum Group A ProteinXPA-1 protein, C elegans

Identifiers

PMID20382984
PMCPMC2871243
OpenAlexW253785728

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.