Evidence map›Paper›PMID 20382980›Full record

ArticleThe Journal of biological chemistry2010

H3K27 trimethylation is an early epigenetic event of p16INK4a silencing for regaining tumorigenesis in fusion reprogrammed hepatoma cells.

Jia-Yi Yao, Lei Zhang, Xin Zhang, Zhi-Ying He, Yue Ma, Li-Jian Hui, Xin Wang, Yi-Ping Hu

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  14. Environmental chemical exposures and human epigenetics.International journal of epidemiology · 2012
    Article
  15. Article
  16. Article
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  18. The association between non-Hodgkin lymphoma and methylation of p73.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2011
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jia-Yi YaoDepartment of Cell Biology, Second Military Medical University, Shanghai 200433, China.
Lei Zhang
Xin Zhang
Zhi-Ying He
Yue Ma
Li-Jian Hui
Xin Wang
Yi-Ping Hu
Chinese Academy of Sciences · CNSecond Military Medical University · CNShanghai Institutes for Biological Sciences · CNCenter for Excellence in Molecular Cell Science · CN

Funding

FoxM1 in Hepatocytes During Liver RepopulationR21DK074561 · NIDDK · UNIVERSITY OF MINNESOTA · PI WANG, XIN · 2006 to 2007
$404k
Generating a Human Hepatocyte-repopulated MouseR03AI065565 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI WANG, XIN · 2005 to 2006
$148k
NIAID NIH HHS AI065565NIAID NIH HHS R03 AI065565NIDDK NIH HHS DK074561NIDDK NIH HHS R21 DK074561
6 · The paper itself

Abstract

Stable epigenetic silencing of p16(INK4a) is a common event in hepatocellular carcinoma (HCC) cells, which is associated with abnormal cell proliferation and liberation from cell cycle arrest. Understanding the early epigenetic events in silencing p16(INK4a) expression may illuminate a prognostic strategy to block HCC development. Toward this end, we created a reprogram cell model by the fusion mouse HCC cells with mouse embryonic stem cells, in which the ES-Hepa hybrids forfeited HCC cell characteristics along with reactivation of the silenced p16(INK4a). HCC characteristics, in terms of gene expression pattern and tumorigenic potential, was restored upon induced differentiation of these reprogrammed ES-Hepa hybrids. The histone methylation pattern relative to p16(INK4a) silencing during differentiation of the ES-Hepa hybrids was analyzed. H3K27 trimethylation at the p16(INK4a) promoter region, occurring in the early onset of p16(INK4a) silencing, was followed by H3K9 dimethylation at later stages. During the induced differentiation of the ES-Hepa hybrids, H3K4 di- and trimethylations were maintained at high levels during the silencing of p16(INK4a), strongly suggesting that H3K4 methylation events did not cause the silencing of p16(INK4a). Our results suggested that the enrichment of H3K27 trimethylation, independent of H3K9 dimethylation, trimethylation, and DNA methylation, was an early event in the silencing of p16(INK4a) during the tumor development. This unique chromatin pattern may be a heritable marker of epigenetic regulation for p16(INK4a) silencing during the developmental process of hepatocellular carcinogenesis.

Indexed as

DNA MethylationEpigenesis, GeneticGene SilencingAnimalsCarcinoma, HepatocellularCell DifferentiationCell Line, TumorChromatinCyclin-Dependent Kinase Inhibitor p16Embryonic Stem CellsFlow CytometryHistonesLiver NeoplasmsMiceChromatinCyclin-Dependent Kinase Inhibitor p16Histones

Identifiers

PMID20382980
PMCPMC2881805
OpenAlexW2111025039

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.