Evidence map›Paper›PMID 20382763›Full record

ArticleJournal of bacteriology2010

A solvent-exposed patch in chaperone-bound YopE is required for translocation by the type III secretion system.

Loren Rodgers, Romila Mukerjea, Sara Birtalan, Devorah Friedberg, Partho Ghosh

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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  8. Review
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  12. Translocation of surface-localized effectors in type III secretion.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Loren RodgersSection of Molecular Biology, University of California, San Diego, 9500 Gilman Dr., La Jolla, CA 92093, USA.
Romila Mukerjea
Sara Birtalan
Devorah Friedberg
Partho Ghosh
University of California, San Diego · USInstitute of Molecular Biology · BG

Funding

GENETIC MECHANISMS AND REGULATIONT32GM007240 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMPTON, RANDOLPH Y. · 1985 to 2019
$23.8M
Protein Translocation by the Type III Secretion SystemR01AI061452 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GHOSH, PARTHO · 2006 to 2010
$2.0M
NIAID NIH HHS R01 AI061452NIGMS NIH HHS T32 GM007240
6 · The paper itself

Abstract

Most effector proteins of bacterial type III secretion (T3S) systems require chaperone proteins for translocation into host cells. Such effectors are bound by chaperones in a conserved and characteristic manner, with the chaperone-binding (Cb) region of the effector wound around the chaperone in a highly extended conformation. This conformation has been suggested to serve as a translocation signal in promoting the association between the chaperone-effector complex and a bacterial component required for translocation. We sought to test a prediction of this model by identifying a potential association site for the Yersinia pseudotuberculosis chaperone-effector pair SycE-YopE. We identified a set of residues in the YopE Cb region that are required for translocation but are dispensable for expression, SycE binding, secretion into the extrabacterial milieu, and stability in mammalian cells. These residues form a solvent-exposed patch on the surface of the chaperone-bound Cb region, and thus their effect on translocation is consistent with the structure of the chaperone-bound Cb region serving as a signal for translocation.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionBacterial Outer Membrane ProteinsGene Expression Regulation, BacterialHeLa CellsHumansMolecular ChaperonesMutationProtein ConformationProtein TransportYersinia pseudotuberculosisBacterial Outer Membrane ProteinsMolecular ChaperonesyopE protein, Yersinia

Identifiers

PMID20382763
PMCPMC2901707
OpenAlexW2169362731

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.