Evidence map›Paper›PMID 20381825›Full record

ArticleVirology2010

Constrained use of CCR5 on CD4+ lymphocytes by R5X4 HIV-1: efficiency of Env-CCR5 interactions and low CCR5 expression determine a range of restricted CCR5-mediated entry.

Lamorris M Loftin, Martha F Kienzle, Yanjie Yi, Benhur Lee, Fang-Hua Lee, Lachlan Gray, Paul R Gorry, Ronald G Collman

Abstract read
In one paragraph

Article in Virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Coreceptors and HIV-1 pathogenesis.Current HIV/AIDS reports · 2011
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Lamorris M LoftinDepartment of Medicine, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Martha F Kienzle
Yanjie Yi
Benhur Lee
Fang-Hua Lee
Lachlan Gray
Paul R Gorry
Ronald G Collman
University of Pennsylvania · USBurnet Institute · AUUniversity of California, Los Angeles · US

Funding

Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ROBERT GROSS · 1999 to 2026
$78.6M
TRAINING IN HIV PATHOGENESIST32AI007632 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI Frederic D Bushman, James L. Riley · 2000 to 2026
$10.6M
SCID HU MODEL FOR HIV INFECTION OF THE CNSP01NS027405 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI GONZALEZ-SCARANO, FRANCISCO · 1989 to 2007
$8.2M
HIV: gp120, Chemokine Receptors &Macrophage ActivationR01MH061139 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI COLLMAN, RONALD G · 1999 to 2015
$5.2M
Dual-Tropic HIV-1 Strains and Primary Cell InfectionR01AI035502 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI COLLMAN, RONALD G · 1998 to 2009
$2.9M
Quantifying differential CD4 and CCR5 usage patterns amongst HIV-1/SIV strainsR21AI092218 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LEE, BENHUR · 2010 to 2011
$422k
NIAID NIH HHS P30 AI045008NIAID NIH HHS R01 AI035502NIAID NIH HHS R21 AI092218NIAID NIH HHS T32 AI007632NIMH NIH HHS R01 MH061139NINDS NIH HHS P01 NS027405
6 · The paper itself

Abstract

R5X4 HIV-1 has impaired utilization of CCR5 on primary CD4+ lymphocytes but the mechanisms responsible are not well defined. Using a panel of diverse R5X4 Envs we identified a spectrum of CCR5 use on CD4+ lymphocytes. Greater lymphocyte CCR5 use correlated with relative resistance to CCR5 mAbs and small molecule antagonists. Increasing CCR5 expression on lymphocytes increased the proportion of entry mediated by CCR5 for all R5X4 isolates except 89.6. In cell lines with regulated CCR5 expression, strains with greater lymphocyte CCR5 use better exploited limiting levels of CCR5. Introduction of an R306S mutation in the 89.6 V3 domain enhanced its utilization of CCR5 at low levels and switched its preference to CCR5 for lymphocyte entry. Thus, the degree to which R5X4 HIV-1 use primary lymphocyte CCR5 is determined by low CCR5 expression coupled with variations in the efficiency of Env-CCR5 interactions, which is in part governed by V3 sequences.

Indexed as

Virus InternalizationAmino Acid SequenceAmino Acid SubstitutionCD4-Positive T-LymphocytesCells, Culturedenv Gene Products, Human Immunodeficiency VirusGene ExpressionHIV-1HumansMolecular Sequence DataMutation, MissenseProtein BindingReceptors, CCR5Receptors, HIVenv Gene Products, Human Immunodeficiency VirusReceptors, CCR5Receptors, HIV

Identifiers

PMID20381825
PMCPMC2872044
OpenAlexW2076931074

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.