Evidence map›Paper›PMID 20378362›Full record

ArticleBioorganic & medicinal chemistry2010

3'-(1,2,3-Triazol-1-yl)-3'-deoxythymidine analogs as substrates for human and Ureaplasma parvum thymidine kinase for structure-activity investigations.

Jay Lin, Vincent Roy, Liya Wang, Li You, Luigi A Agrofoglio, Dominique Deville-Bonne, Tamara R McBrayer, Steven J Coats, Raymond F Schinazi, Staffan Eriksson

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Synthesis of deuterated 1,2,3-triazoles.The Journal of organic chemistry · 2012
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jay LinDepartment of Anatomy, Physiology and Biochemistry, Veterinary Medical Biochemistry, Swedish University Agricultural Sciences, Uppsala, Sweden.
Vincent Roy
Liya Wang
Li You
Luigi A Agrofoglio
Dominique Deville-Bonne
Tamara R McBrayer
Steven J Coats
Raymond F Schinazi
Staffan Eriksson

Funding

Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Hannah LF Cooper · 2002 to 2026
$74.0M
Synthesis and Biotransformation of Anti-HIV ProdrugsR37AI025899 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI CHU, CHUNG K · 2001 to 2010
$4.4M
NUCLEOSIDES WITH DUAL ANTI-HIV AND HBV ACTIVITYR37AI041980 · NIAID · EMORY UNIVERSITY · PI SCHINAZI, RAYMOND FELIX · 2000 to 2009
$2.1M
NIAID NIH HHS 4R37-AI-025899NIAID NIH HHS 5P30-AI-50409NIAID NIH HHS 5R37-AI-041980NIAID NIH HHS P30 AI050409NIAID NIH HHS R37 AI025899NIAID NIH HHS R37 AI041980
6 · The paper itself

Abstract

The pathogenic mycoplasma Ureaplasma parvum (Up) causes opportunistic infections and relies on salvage of nucleosides for DNA synthesis and Up thymidine kinase (UpTK) provides the necessary thymidine nucleotides. The anti-HIV compound 3 -azido-3'-deoxythymidine (AZT) is a good substrate for TK. Methods for a rapid and efficient synthesis of new 3'-alpha-[1,2,3]triazol-3'-deoxythymidine analogs from AZT under Huisgen conditions are described. Thirteen 3'-analogues were tested with human cytosolic thymidine kinase (hTK1) and UpTK. The new analogs showed higher efficiencies (K(m)/V(max) values) in all cases with UpTK than with hTK1. Still, hTK1 was preferentially inhibited by 9 out of 10 tested analogs. Structural models of UpTK and hTK1 were constructed and used to explain the kinetic results. Two different binding modes of the nucleosides within the active sites of both enzymes were suggested with one predominating in the bacterial enzyme and the other in hTK1. These results will aid future development of anti-mycoplasma nucleosides.

Indexed as

Anti-Infective AgentsEnzyme InhibitorsThymidineUreaplasmaAmino Acid SequenceHumansInhibitory Concentration 50Molecular Sequence DataMolecular StructureSequence AlignmentStructure-Activity RelationshipSubstrate SpecificityThymidine KinaseTriazolesZidovudineAnti-Infective AgentsEnzyme InhibitorsThymidineThymidine KinaseTriazolesZidovudine

Identifiers

PMID20378362
PMCPMC7744269

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.