Evidence map›Paper›PMID 20375344›Full record

ArticleInvestigative ophthalmology & visual science2010

Deciphering the structure and function of Als2cr4 in the mouse retina.

Freddi I Zuniga, Cheryl M Craft

Open access · hybridAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Abnormal Cone and Rod Photoreceptor Morphogenesis in gdf6a Mutant Zebrafish.Investigative ophthalmology & visual science · 2020
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Visual Cone Arrestin 4 Contributes to Visual Function and Cone Health.Investigative ophthalmology & visual science · 2015
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Freddi I ZunigaMary D. Allen Laboratory for Vision Research, Doheny Eye Institute, Los Angeles, CA 90033-9224, USA.
Cheryl M Craft
Doheny Eye Institute · USUniversity of Southern California · US

Funding

VISION RESEARCHP30EY003040 · NEI · DOHENY EYE INSTITUTE · PI SUN, DEMING · 1985 to 2013
$7.0M
Mechanisms of Cone Pigment DeactivationR01EY015851 · NEI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CRAFT, CHERYL MAE · 2005 to 2009
$1.8M
Functional Partners of Cone ArrestinF31GM079910 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ZUNIGA, FREDDI ISAAC · 2007 to 2009
$113k
NEI NIH HHS EY015851NEI NIH HHS EY03040NEI NIH HHS P30 EY003040NEI NIH HHS R01 EY015851NIGMS NIH HHS 1F31GM079910NIGMS NIH HHS F31 GM079910
6 · The paper itself

Abstract

purposeThe role of Als2cr4 (amyotrophic lateral sclerosis 2 [juvenile] chromosome region, candidate 4; also known as hypothetical protein FLJ33282) in the mouse retina was determined by characterizing the molecular structure, cellular interacting partners, and potential biochemical functions. Previous in situ hybridization and gene expression profiles show that the mRNAs encoding Als2cr4 are abundant in the eye, hippocampus, cerebellum, and olfactory bulb.

methodsFrom predicted antigenic epitopes of Als2cr4, two novel antibodies were developed to examine protein expression and morphologic localization in retinas from light-adapted and dark-adapted mice by immunohistochemistry, immunoblot analysis, and immunoelectron microscopy, and then immunoprecipitation was performed to identify interacting proteins by mass spectroscopy.

resultsPeptide antibodies with Als2cr4 antigenic epitopes from either the amino- or carboxyl terminus were characterized with Als2cr4 recombinant proteins and peptide competition assays. Als2cr4 is a 45-kDa insoluble protein, highly enriched in retina, and localizes to photoreceptor outer segments, ciliary complex, and horizontal cells in the outer plexiform layer. Immunoelectron microscopy for Als2cr4 verified its expression in the discs of photoreceptor outer segments. Immunoprecipitation and mass spectroscopy identified eight potential interacting partners: vimentin, actin, myosin Va, myosin VI, myosin X, myosin XIV, kinesin 1, Als2cr4, and lamin B-1.

conclusionsAls2cr4 is a novel protein, with a probable tetraspanin-like membrane structure, that is localized in photoreceptors and in the postsynaptic outer plexiform layer and that interacts with cytoskeletal proteins. Als2cr4 may be involved in membrane transport between the photoreceptor inner and outer segments and may be a key component in maintaining the structural integrity of the outer segment.

Indexed as

Adaptation, OcularAmino Acid SequenceAnimalsCell LineDark AdaptationEpitope MappingEye ProteinsFemaleHumansImmunohistochemistryKidneyLight Signal TransductionMaleMass SpectrometryMembrane ProteinsMiceEye ProteinsMembrane ProteinsRecombinant ProteinsRNA, MessengerTmem237 protein, mouse

Identifiers

PMID20375344
PMCPMC2941180
OpenAlexW2036665769

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.