Evidence map›Paper›PMID 20374527›Full record

ArticleThe Plant journal : for cell and molecular biology2010

Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism.

Julia Hofmann, Abd El Naser El Ashry, Shahbaz Anwar, Alexander Erban, Joachim Kopka, Florian Grundler

Open access · greenAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
11.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 186 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Syncytium Induced by Plant-Parasitic Nematodes.Results and problems in cell differentiation · 2024
    Review
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Metabolic Analysis of the Development of the Plant-Parasitic Cyst NematodesInternational journal of molecular sciences · 2021
    Article
  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Julia HofmannDepartment of Applied Plant Sciences and Plant Biotechnology, Institute of Plant Protection, BOKU - University of Natural Resources and Applied Life Sciences, Vienna, Peter Jordan-Strasse 82, A-1190 Vienna, Austria. julia.hofmann@boku.ac.at
Abd El Naser El Ashry
Shahbaz Anwar
Alexander Erban
Joachim Kopka
Florian Grundler
BOKU University · ATMax Planck Institute of Molecular Plant Physiology · DE

Funding

Austrian Science Fund FWF P 21717
6 · The paper itself

Abstract

The plant parasitic beet cyst nematode Heterodera schachtii induces syncytial feeding structures in Arabidopsis roots. The feeding structures form strong sink tissues that have been suggested to be metabolically highly active. In the present study, metabolic profiling and gene targeted expression analyses were performed in order to study the local and systemic effects of nematode infection on the plant host. The results showed increased levels of many amino acids and phosphorylated metabolites in syncytia, as well as high accumulation of specific sugars such as 1-kestose that do not accumulate naturally in Arabidopsis roots. A correlation-based network analysis revealed highly activated and coordinated metabolism in syncytia compared to non-infected control roots. An integrated analysis of the central primary metabolism showed a clear coherence of metabolite and transcript levels, indicating transcriptional regulation of specific pathways. Furthermore, systemic effects of nematode infection were demonstrated by correlation-based network analysis as well as independent component analysis. 1-kestose, raffinose, alpha,alpha-trehalose and three non-identified analytes showed clear systemic accumulation, indicating future potential for diagnostic and detailed metabolic analyses. Our studies open the door towards understanding the complex remodelling of plant metabolism in favour of the parasitizing nematode.

Indexed as

MetabolomeAnimalsArabidopsisGas Chromatography-Mass SpectrometryGene Expression Regulation, PlantGiant CellsNematodaPlant DiseasesPlant RootsRaffinoseRNA, PlantTrehaloseTrisaccharides1-kestoseRaffinoseRNA, PlantTrehaloseTrisaccharides

Identifiers

PMID20374527
PMCPMC2904900
OpenAlexW1893854072

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.