Evidence map›Paper›PMID 20374494›Full record

ArticleMolecular microbiology2010

Redox sensing by a Rex-family repressor is involved in the regulation of anaerobic gene expression in Staphylococcus aureus.

Martin Pagels, Stephan Fuchs, Jan Pané-Farré, Christian Kohler, Leonhard Menschner, Michael Hecker, Peter J McNamarra, Mikael C Bauer, Claes von Wachenfeldt, Manuel Liebeke and 5 more

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.

0numbers the graph read from it
0cells of the map it votes in
113citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

113 citing papers in PubMed, 177 citations in OpenAlex.

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  10. The Complex Intracellular Lifecycle ofInternational journal of molecular sciences · 2024
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  13. Development of ZnSynthetic and systems biotechnology · 2024
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  14. Quorum-sensingbioRxiv : the preprint server for biology · 2024
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  15. Factors impacting the regulation ofMicrobiology spectrum · 2023
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  16. Frontiers in cellular and infection microbiology · 2023
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  17. AIMS microbiology · 2023
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  18. One Step Forward with Dry Surface Biofilm (DSB) ofInternational journal of molecular sciences · 2022
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53 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 4 countries.

Martin PagelsInstitute for Microbiology, University of Greifswald, Greifswald, Germany.
Stephan Fuchs
Jan Pané-Farré
Christian Kohler
Leonhard Menschner
Michael Hecker
Peter J McNamarra
Mikael C Bauer
Claes von Wachenfeldt
Manuel Liebeke
Michael Lalk
Gunnar Sander
Christof von Eiff
Richard A Proctor
Susanne Engelmann
Institute of Microbiology · CNUniversität Greifswald · DEUniversity Hospital Münster · DEUniversity of Wisconsin–Madison · USLund University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An alignment of upstream regions of anaerobically induced genes in Staphylococcus aureus revealed the presence of an inverted repeat, corresponding to Rex binding sites in Streptomyces coelicolor. Gel shift experiments of selected upstream regions demonstrated that the redox-sensing regulator Rex of S. aureus binds to this inverted repeat. The binding sequence--TTGTGAAW(4)TTCACAA--is highly conserved in S. aureus. Rex binding to this sequence leads to the repression of genes located downstream. The binding activity of Rex is enhanced by NAD+ while NADH, which competes with NAD+ for Rex binding, decreases the activity of Rex. The impact of Rex on global protein synthesis and on the activity of fermentation pathways under aerobic and anaerobic conditions was analysed by using a rex-deficient strain. A direct regulatory effect of Rex on the expression of pathways that lead to anaerobic NAD+ regeneration, such as lactate, formate and ethanol formation, nitrate respiration, and ATP synthesis, is verified. Rex can be considered a central regulator of anaerobic metabolism in S. aureus. Since the activity of lactate dehydrogenase enables S. aureus to resist NO stress and thus the innate immune response, our data suggest that deactivation of Rex is a prerequisite for this phenomenon.

Indexed as

Gene Expression Regulation, BacterialOxidation-ReductionBacterial ProteinsBase SequenceBinding SitesCell RespirationHumansMolecular Sequence DataMutagenesis, Site-DirectedNADPromoter Regions, GeneticProtein BindingRepressor ProteinsStaphylococcus aureusTranscription, GeneticBacterial ProteinsNADRepressor Proteins

Identifiers

PMID20374494
PMCPMC2883068
OpenAlexW2161651529

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.