Evidence map›Paper›PMID 20372961›Full record

ArticleCellular and molecular life sciences : CMLS2010

Beta-catenin/TCF4 transactivates miR-30e during intestinal cell differentiation.

Y Liao, B Lönnerdal

Open access · hybridAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Wnt-Signaling Regulated by Glucocorticoid-Induced miRNAs.International journal of molecular sciences · 2021
    Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Y LiaoDepartment of Nutrition, University of California, One Shields Ave., Davis, CA, 95616, USA.
B Lönnerdal
University of California, Davis · USUniversity of California System · US

Funding

VITAMINS, AMINO ACIDS, AND RELATED PRODUCTS CORE LABORATORYP30DK035747 · NIDDK · UNIVERSITY OF CALIFORNIA DAVIS · PI HALSTED, CHARLES HOPKINSON · 1986 to 2005
$4.7M
NIDDK NIH HHS DK 35747NIDDK NIH HHS P30 DK035747
6 · The paper itself

Abstract

The Wnt/beta-catenin/TCF4 pathway plays critical roles in the maintenance of small intestinal epithelium; however, downstream targets of the beta-catenin/TCF4 complex are not extensively characterized. We identified miR-30e as an immediate target activated by the beta-catenin/TCF4 complex. miR-30e was detected in the peri-nuclear region of the intestinal crypt IEC-6 cells. Bioinformatics analysis revealed clustered beta-catenin/TCF4 binding sites within the miR-30e promoter region. This promoter region was cloned into pGL3-control luciferase reporter vector, with the enhancer region removed. Transfection of pCMV-SPORT6-beta-catenin expression vector dose-dependently increased luciferase activity, and co-transfection of pCMV-SPORT6-TCF4 expression vector further enhanced the promoter activity. Dexamethasone-induced IEC-6 cells differentiation caused a 2.5-fold increase in miR-30e expression, and upon beta-catenin siRNA transfection, miR-30e increased 1.3-fold. Electrophoretic mobility shift assay and chromatin immunoprecipitation assay confirmed the binding between beta-catenin/TCF4 complexes from IEC-6 nuclear extracts and the putative sequences in the miR-30e promoter. These results demonstrate that beta-catenin/TCF4 transactivates miR-30e during intestinal cell differentiation.

Indexed as

Basic Helix-Loop-Helix Leucine Zipper Transcription Factorsbeta CateninCell DifferentiationCell LineChromatin ImmunoprecipitationComputational BiologyDexamethasoneDNA PrimersElectrophoretic Mobility Shift AssayHumansImmunoblottingIntestinal MucosaMicroRNAsMicroscopy, ConfocalPolymerase Chain ReactionTranscriptional ActivationBasic Helix-Loop-Helix Leucine Zipper Transcription Factorsbeta CateninDexamethasoneDNA PrimersMicroRNAsMIRN30b microRNA, humanTCF4 protein, humanTranscription Factor 4Transcription Factors

Identifiers

PMID20372961
PMCPMC2921486
OpenAlexW2010508270

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.