Evidence map›Paper›PMID 20371823›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2010

Distinct functions of acj6 splice forms in odor receptor gene choice.

Lei Bai, John R Carlson

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. The Two Main Olfactory Receptor Families inFrontiers in cellular neuroscience · 2018
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Combinatorial expression of Brn3 transcription factors in somatosensory neurons: genetic and morphologic analysis.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
  19. Sex-linked transcription factor involved in a shift of sex-pheromone preference in the silkmoth Bombyx mori.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Lei BaiDepartment of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, Connecticut 06520, USA.
John R Carlson
Yale University · US

Funding

ANALYSIS OF ODORANT RECEPTOR GENESR01DC004729 · NIDCD · YALE UNIVERSITY · PI John R Carlson · 2001 to 2026
$9.2M
GENETIC AND MOLECULAR ANALYSIS OF OLFACTIONR01DC002174 · NIDCD · YALE UNIVERSITY · PI CARLSON, JOHN R · 1994 to 2024
$8.0M
Analysis of a Large Family of Candidate Taste ReceptorsR01GM063364 · NIGMS · YALE UNIVERSITY · PI CARLSON, JOHN R · 2001 to 2008
$2.3M
NIDCD NIH HHS R01 DC002174NIDCD NIH HHS R01 DC004729NIGMS NIH HHS R01 GM063364
6 · The paper itself

Abstract

Individual olfactory receptor neurons (ORNs) selectively express one or a small number of odor receptors from among a large receptor repertoire. The expression of an odor receptor dictates the odor response spectrum of the ORN. The process of receptor gene choice relies in part on a combinatorial code of transcription factors. In Drosophila, the POU domain transcription factor Acj6 is one element of the transcription factor code. In acj6 null mutants, many ORNs do not express an appropriate odor receptor gene and thus are not correctly specified. We find that acj6 is alternatively spliced to yield many structurally distinct transcripts in the olfactory organs. We generate flies that express single splice forms of acj6 in an acj6(-) background. We find that different splice forms are functionally distinct; they differ in their abilities to specify ORN identities. Some individual splice forms can fully rescue the specification of some ORNs. Individual splice forms can function both positively and negatively in receptor gene regulation. ORNs differ in their requirements for splice forms; some are not fully rescued by any single splice form tested, suggesting that some ORNs may require the combinatorial action of multiple splice forms. Late expression of some acj6 splice forms is sufficient to rescue some ORN classes, consistent with a direct role for Acj6 isoforms in receptor gene expression. The results indicate that alternative splicing may add another level of richness to the regulatory code that underlies the process of odor receptor gene choice.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsAnimals, Genetically ModifiedDrosophila melanogasterDrosophila ProteinsGene Knockout TechniquesLarvaMolecular Sequence DataNerve Tissue ProteinsOlfactory Receptor NeuronsPOU Domain FactorsProtein IsoformsReceptors, Odorantacj6 protein, DrosophilaDrosophila ProteinsNerve Tissue ProteinsPOU Domain FactorsProtein IsoformsReceptors, Odorant

Identifiers

PMID20371823
PMCPMC2858447
OpenAlexW2094465010

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.