ArticleThe Plant cell2010
Mapping plant interactomes using literature curated and predicted protein-protein interaction data sets.
Article in The Plant cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
15 citing papers in PubMed.
- A rice protein interaction network reveals high centrality nodes and candidate pathogen effector targets.Computational and structural biotechnology journal · 2022Article
- PlaPPISite: a comprehensive resource for plant protein-protein interaction sites.BMC plant biology · 2020Article
- CaFrontiers in plant science · 2020Review
- Construction and analysis of an interologous protein-protein interaction network of Camellia sinensis leaf (TeaLIPIN) from RNA-Seq data sets.Plant cell reports · 2019Article
- Predicted Arabidopsis Interactome Resource and Gene Set Linkage Analysis: A Transcriptomic Analysis Resource.Plant physiology · 2018Article
- Genome-Wide Inference of Protein-Protein Interaction Networks Identifies Crosstalk in Abscisic Acid Signaling.Plant physiology · 2016Article
- Proteome-wide remodeling of protein location and function by stress.Proceedings of the National Academy of Sciences of the United States of America · 2014Article
- Getting to the edge: protein dynamical networks as a new frontier in plant-microbe interactions.Frontiers in plant science · 2014Review
- Curation accuracy of model organism databases.Database : the journal of biological databases and curation · 2014Article
- Proteome-wide discovery of mislocated proteins in cancer.Genome research · 2013Article
- Arabidopsis peroxisome proteomics.Frontiers in plant science · 2013Article
- Inferring the Brassica rapa Interactome Using Protein-Protein Interaction Data from Arabidopsis thaliana.Frontiers in plant science · 2012Article
- Coping with stresses: roles of calcium- and calcium/calmodulin-regulated gene expression.The Plant cell · 2011Review
- The predicted Arabidopsis interactome resource and network topology-based systems biology analyses.The Plant cell · 2011Article
- PAIR: the predicted Arabidopsis interactome resource.Nucleic acids research · 2011Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
Most cellular processes are enabled by cohorts of interacting proteins that form dynamic networks within the plant proteome. The study of these networks can provide insight into protein function and provide new avenues for research. This article informs the plant science community of the currently available sources of protein interaction data and discusses how they can be useful to researchers. Using our recently curated IntAct Arabidopsis thaliana protein-protein interaction data set as an example, we discuss potentials and limitations of the plant interactomes generated to date. In addition, we present our efforts to add value to the interaction data by using them to seed a proteome-wide map of predicted protein subcellular locations.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.