Evidence map›Paper›PMID 20371601›Full record

ArticleThe Journal of biological chemistry2010

Control of mRNA export and translation termination by inositol hexakisphosphate requires specific interaction with Gle1.

Abel R Alcázar-Román, Timothy A Bolger, Susan R Wente

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Article
  2. Review
  3. Identification of divergentbioRxiv : the preprint server for biology · 2025
    Article
  4. Molecular Structure of the mRNA Export Factor Gle1 fromInternational journal of molecular sciences · 2025
    Article
  5. Advances in the understanding of nuclear pore complexes in human diseases.Journal of cancer research and clinical oncology · 2024
    Review
  6. Review
  7. Review
  8. Unraveling docking and initiation of mRNA export through the nuclear pore complex.BioEssays : news and reviews in molecular, cellular and developmental biology · 2022
    Article
  9. Article
  10. Distinct roles of nuclear basket proteins in directing the passage of mRNA through the nuclear pore.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Review
  12. Review
  13. Mutation Screening of theFrontiers in neuroscience · 2021
    Article
  14. Review
  15. Article
  16. Dbp5/DDX19 between Translational Readthrough and Nonsense Mediated Decay.International journal of molecular sciences · 2020
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Abel R Alcázar-RománDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-8240, USA.
Timothy A Bolger
Susan R Wente

Funding

BIOCHEMICAL &CHEMICAL TRAINING FOR CANCER RESEARCHT32CA009582 · NCI · VANDERBILT UNIVERSITY · PI David K Cortez · 1987 to 2026
$8.8M
Molecular Analysis of Nuclear Pore Complex FunctionR37GM051219 · NIGMS · VANDERBILT UNIVERSITY · PI WENTE, SUSAN R. · 2010 to 2019
$5.6M
MOLECULAR ANALYSIS OF NUCLEAR PORE COMPLEX FUNCTIONR01GM051219 · NIGMS · WASHINGTON UNIVERSITY · PI WENTE, SUSAN R. · 1994 to 2009
$4.2M
The function of mRNA export factor Gle1 in translation regulationF32GM082065 · NIGMS · VANDERBILT UNIVERSITY · PI BOLGER, TIMOTHY A · 2007 to 2008
$96k
NCI NIH HHS T32 CA009582NIGMS NIH HHS F32 GM082065NIGMS NIH HHS F32-GM082065NIGMS NIH HHS R01 GM051219NIGMS NIH HHS R01-GM51219NIGMS NIH HHS R37 GM051219
6 · The paper itself

Abstract

The unidirectional translocation of messenger RNA (mRNA) through the aqueous channel of the nuclear pore complex (NPC) is mediated by interactions between soluble mRNA export factors and distinct binding sites on the NPC. At the cytoplasmic side of the NPC, the conserved mRNA export factors Gle1 and inositol hexakisphosphate (IP(6)) play an essential role in mRNA export by activating the ATPase activity of the DEAD-box protein Dbp5, promoting localized messenger ribonucleoprotein complex remodeling, and ensuring the directionality of the export process. In addition, Dbp5, Gle1, and IP(6) are also required for proper translation termination. However, the specificity of the IP(6)-Gle1 interaction in vivo is unknown. Here, we characterize the biochemical interaction between Gle1 and IP(6) and the relationship to Dbp5 binding and stimulation. We identify Gle1 residues required for IP(6) binding and show that these residues are needed for IP(6)-dependent Dbp5 stimulation in vitro. Furthermore, we demonstrate that Gle1 is the primary target of IP(6) for both mRNA export and translation termination in vivo. In Saccharomyces cerevisiae cells, the IP(6)-binding mutants recapitulate all of the mRNA export and translation termination defects found in mutants depleted of IP(6). We conclude that Gle1 specifically binds IP(6) and that this interaction is required for the full potentiation of Dbp5 ATPase activity during both mRNA export and translation termination.

Indexed as

Amino Acid SequenceBiological TransportDEAD-box RNA HelicasesGlutathione TransferaseInositolKineticsModels, BiologicalMolecular Sequence DataNuclear PoreNuclear Pore Complex ProteinsNucleocytoplasmic Transport ProteinsPhytic AcidProtein BindingProtein BiosynthesisRNA, MessengerSaccharomyces cerevisiaeDBP5 protein, S cerevisiaeDEAD-box RNA HelicasesGLE1 protein, S cerevisiaeGlutathione TransferaseInositolNuclear Pore Complex ProteinsNucleocytoplasmic Transport ProteinsPhytic AcidRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID20371601
PMCPMC2878036

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.