Evidence map›Paper›PMID 20369020›Full record

ArticlePLoS genetics2010

Phosphorylation of the conserved transcription factor ATF-7 by PMK-1 p38 MAPK regulates innate immunity in Caenorhabditis elegans.

Robert P Shivers, Daniel J Pagano, Tristan Kooistra, Claire E Richardson, Kirthi C Reddy, Janelle K Whitney, Odile Kamanzi, Kunihiro Matsumoto, Naoki Hisamoto, Dennis H Kim

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed
0.1field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 7 citations in OpenAlex.

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    Review
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71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Robert P ShiversDepartment of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, United States of America.
Daniel J Pagano
Tristan Kooistra
Claire E Richardson
Kirthi C Reddy
Janelle K Whitney
Odile Kamanzi
Kunihiro Matsumoto
Naoki Hisamoto
Dennis H Kim
Massachusetts Institute of Technology · USNagoya University · JP

Funding

Molecular Genetics of Innate Immunity in C. elegansR01GM084477 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI KIM, DENNIS H · 2007 to 2020
$4.6M
Howard Hughes Medical InstituteNIGMS NIH HHS GM084477NIGMS NIH HHS R01 GM084477
6 · The paper itself

Abstract

Innate immunity in Caenorhabditis elegans requires a conserved PMK-1 p38 mitogen-activated protein kinase (MAPK) pathway that regulates the basal and pathogen-induced expression of immune effectors. The mechanisms by which PMK-1 p38 MAPK regulates the transcriptional activation of the C. elegans immune response have not been identified. Furthermore, in mammalian systems the genetic analysis of physiological targets of p38 MAPK in immunity has been limited. Here, we show that C. elegans ATF-7, a member of the conserved cyclic AMP-responsive element binding (CREB)/activating transcription factor (ATF) family of basic-region leucine zipper (bZIP) transcription factors and an ortholog of mammalian ATF2/ATF7, has a pivotal role in the regulation of PMK-1-mediated innate immunity. Genetic analysis of loss-of-function alleles and a gain-of-function allele of atf-7, combined with expression analysis of PMK-1-regulated genes and biochemical characterization of the interaction between ATF-7 and PMK-1, suggest that ATF-7 functions as a repressor of PMK-1-regulated genes that undergoes a switch to an activator upon phosphorylation by PMK-1. Whereas loss-of-function mutations in atf-7 can restore basal expression of PMK-1-regulated genes observed in the pmk-1 null mutant, the induction of PMK-1-regulated genes by pathogenic Pseudomonas aeruginosa PA14 is abrogated. The switching modes of ATF-7 activity, from repressor to activator in response to activated PMK-1 p38 MAPK, are reminiscent of the mechanism of regulation mediated by the corresponding ancestral Sko1p and Hog1p proteins in the yeast response to osmotic stress. Our data point to the regulation of the ATF2/ATF7/CREB5 family of transcriptional regulators by p38 MAPK as an ancient conserved mechanism for the control of innate immunity in metazoans, and suggest that ATF2/ATF7 may function in a similar manner in the regulation of mammalian innate immunity.

Indexed as

Immunity, InnateActivating Transcription FactorsAmino Acid SequenceAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsGenes, HelminthMitogen-Activated Protein KinasesMolecular Sequence DataPhosphorylationPhylogenySequence AlignmentTranscription FactorsActivating Transcription FactorsATF-7 protein, C elegansCaenorhabditis elegans ProteinsMitogen-Activated Protein KinasesPmk-1 protein, C elegansTranscription Factors

Identifiers

PMID20369020
PMCPMC2848548
OpenAlexW1528203877

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.