Evidence map›Paper›PMID 20368357›Full record

ArticleMolecular and cellular biology2010

A genome-wide RNA interference screen identifies a differential role of the mediator CDK8 module subunits for GATA/ RUNX-activated transcription in Drosophila.

Vanessa Gobert, Dani Osman, Stéphanie Bras, Benoit Augé, Muriel Boube, Henri-Marc Bourbon, Thomas Horn, Michael Boutros, Marc Haenlin, Lucas Waltzer

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 39 citations in OpenAlex.

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  6. Development (Cambridge, England) · 2020
    Article
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  9. Molecular and cellular biology · 2019
    Article
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  12. Article
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  14. Mediator kinase module and human tumorigenesis.Critical reviews in biochemistry and molecular biology · 2015
    Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Vanessa GobertUniversité de Toulouse; UPS, CBD (Centre de Biologie du Développement), Bâtiment 4R3, 118 route de Narbonne, 31062 Toulouse, France.
Dani Osman
Stéphanie Bras
Benoit Augé
Muriel Boube
Henri-Marc Bourbon
Thomas Horn
Michael Boutros
Marc Haenlin
Lucas Waltzer
Université de Toulouse · FRCentre de Biologie du Développement · FRCentre National de la Recherche Scientifique · FRGerman Cancer Research Center · DEHeidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription factors of the RUNX and GATA families play key roles in the control of cell fate choice and differentiation, notably in the hematopoietic system. During Drosophila hematopoiesis, the RUNX factor Lozenge and the GATA factor Serpent cooperate to induce crystal cell differentiation. We used Serpent/Lozenge-activated transcription as a paradigm to identify modulators of GATA/RUNX activity by a genome-wide RNA interference screen in cultured Drosophila blood cells. Among the 129 factors identified, several belong to the Mediator complex. Mediator is organized in three modules plus a regulatory "CDK8 module," composed of Med12, Med13, CycC, and Cdk8, which has long been thought to behave as a single functional entity. Interestingly, our data demonstrate that Med12 and Med13 but not CycC or Cdk8 are essential for Serpent/Lozenge-induced transactivation in cell culture. Furthermore, our in vivo analysis of crystal cell development show that, while the four CDK8 module subunits control the emergence and the proliferation of this lineage, only Med12 and Med13 regulate its differentiation. We thus propose that Med12/Med13 acts as a coactivator for Serpent/Lozenge during crystal cell differentiation independently of CycC/Cdk8. More generally, we suggest that the set of conserved factors identified herein may regulate GATA/RUNX activity in mammals.

Indexed as

RNA InterferenceAnimalsCell DifferentiationCells, CulturedCyclin-Dependent Kinase 8DNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGATA Transcription FactorsGene Expression Regulation, DevelopmentalGenomeHematopoiesisHigh-Throughput Screening AssaysMediator ComplexProtein Interaction MappingProtein SubunitsCyclin-Dependent Kinase 8DNA-Binding ProteinsDrosophila ProteinsGATA Transcription Factorslz protein, DrosophilaMediator ComplexProtein Subunitssrp protein, DrosophilaTranscription Factors

Identifiers

PMID20368357
PMCPMC2876525
OpenAlexW2065221565

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.