Evidence map›Paper›PMID 20360965›Full record

ArticlePLoS pathogens2010

Origin and evolution of sulfadoxine resistant Plasmodium falciparum.

Sumiti Vinayak, Md Tauqeer Alam, Tonya Mixson-Hayden, Andrea M McCollum, Rithy Sem, Naman K Shah, Pharath Lim, Sinuon Muth, William O Rogers, Thierry Fandeur and 6 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 133 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. A spatio-temporal model of multi-marker antimalarial resistance.Journal of the Royal Society, Interface · 2024
    Article
  5. Article
  6. Polymorphism of Drug Resistance GenesTropical medicine and infectious disease · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Surveillance of Antimalarial Drug-Resistance Genes in ImportedFrontiers in cellular and infection microbiology · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Artemether-Lumefantrine Efficacy for the Treatment of UncomplicatedThe American journal of tropical medicine and hygiene · 2020
    Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 3 countries.

Sumiti VinayakAtlanta Research and Education Foundation, Atlanta, Georgia, United States of America.
Md Tauqeer Alam
Tonya Mixson-Hayden
Andrea M McCollum
Rithy Sem
Naman K Shah
Pharath Lim
Sinuon Muth
William O Rogers
Thierry Fandeur
John W Barnwell
Ananias A Escalante
Chansuda Wongsrichanalai
Frederick Ariey
Steven R Meshnick
Venkatachalam Udhayakumar
Centers for Disease Control and Prevention · USCambodia National Malaria Center · KHInstitut Pasteur du Cambodge · KHNational Center for Emerging and Zoonotic Infectious Diseases · USUniversity of North Carolina Health Care · USArizona State University · USInstitut Pasteur · FR

Funding

A Global Comparative Study of the Evolution of Antimalarial Drug ResistanceR01GM084320 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI ESCALANTE, ANANIAS ALBERTO · 2008 to 2011
$1.4M
Research Training for Cambodian Scientists in Effective*D43TW007402 · FIC · NAVAL MEDICAL RESEARCH CENTER · PI ROGERS, WILLIAM OSCAR · 2005 to 2006
$293k
FIC NIH HHS 5D43TW007402-02FIC NIH HHS D43 TW007402NIGMS NIH HHS R01 GM084320NIGMS NIH HHS R01GM084320
6 · The paper itself

Abstract

The Thailand-Cambodia border is the epicenter for drug-resistant falciparum malaria. Previous studies have shown that chloroquine (CQ) and pyrimethamine resistance originated in this region and eventually spread to other Asian countries and Africa. However, there is a dearth in understanding the origin and evolution of dhps alleles associated with sulfadoxine resistance. The present study was designed to reveal the origin(s) of sulfadoxine resistance in Cambodia and its evolutionary relationship to African and South American dhps alleles. We sequenced 234 Cambodian Plasmodium falciparum isolates for the dhps codons S436A/F, A437G, K540E, A581G and A613S/T implicated in sulfadoxine resistance. We also genotyped 10 microsatellite loci around dhps to determine the genetic backgrounds of various alleles and compared them with the backgrounds of alleles prevalent in Africa and South America. In addition to previously known highly-resistant triple mutant dhps alleles SGEGA and AGEAA (codons 436, 437, 540, 581, 613 are sequentially indicated), a large proportion of the isolates (19.3%) contained a 540N mutation in association with 437G/581G yielding a previously unreported triple mutant allele, SGNGA. Microsatellite data strongly suggest the strength of selection was greater on triple mutant dhps alleles followed by the double and single mutants. We provide evidence for at least three independent origins for the double mutants, one each for the SGKGA, AGKAA and SGEAA alleles. Our data suggest that the triple mutant allele SGEGA and the novel allele SGNGA have common origin on the SGKGA background, whereas the AGEAA triple mutant was derived from AGKAA on multiple, albeit limited, genetic backgrounds. The SGEAA did not share haplotypes with any of the triple mutants. Comparative analysis of the microsatellite haplotypes flanking dhps alleles from Cambodia, Kenya, Cameroon and Venezuela revealed an independent origin of sulfadoxine resistant alleles in each of these regions.

Indexed as

AfricaAntimalarialsCambodiaCodonDrug ResistanceEvolution, MolecularGenes, ProtozoanGenetic VariationHaplotypesHumansLinkage DisequilibriumMalaria, FalciparumMicrosatellite RepeatsPlasmodium falciparumPrevalenceSouth AmericaAntimalarialsCodonSulfadoxine

Identifiers

PMID20360965
PMCPMC2847944
OpenAlexW2070239562

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.