Evidence map›Paper›PMID 20360772›Full record

ArticleNature protocols2010

Modular system for the construction of zinc-finger libraries and proteins.

Beatriz Gonzalez, Lauren J Schwimmer, Roberta P Fuller, Yongjun Ye, Lily Asawapornmongkol, Carlos F Barbas

Abstract read
In one paragraph

Article in Nature protocols, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Endosomal disentanglement of a transducible artificial transcription factor targeting endothelin receptor A.Molecular therapy : the journal of the American Society of Gene Therapy · 2022
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Reprogramming cell fate with a genome-scale library of artificial transcription factors.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  16. Article
  17. Article
  18. Genome-editing Technologies for Gene and Cell Therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2016
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Beatriz GonzalezThe Skaggs Institute for Chemical Biology, La Jolla, California, USA.
Lauren J Schwimmer
Roberta P Fuller
Yongjun Ye
Lily Asawapornmongkol
Carlos F Barbas

Funding

Transcriptional Blockades of HIV-1R01GM065059 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI BARBAS, CARLOS F · 2003 to 2010
$2.8M
Zinc Finger Recombinases for Endogenous Genome TailoringR21CA126664 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI BARBAS, CARLOS F · 2008 to 2009
$461k
NCI NIH HHS R21 CA126664NIGMS NIH HHS R01 GM065059
6 · The paper itself

Abstract

Engineered zinc-finger transcription factors (ZF-TF) are powerful tools to modulate the expression of specific genes. Complex libraries of ZF-TF can be delivered into cells to scan the genome for genes responsible for a particular phenotype or to select the most effective ZF-TF to regulate an individual gene. In both cases, the construction of highly representative and unbiased libraries is critical. In this protocol, we describe a user-friendly ZF technology suitable for the creation of complex libraries and the construction of customized ZF-TFs. The new technology described here simplifies the building of ZF libraries, avoids PCR-introduced bias and ensures equal representation of every module. We also describe the construction of a customized ZF-TF that can be transferred to a number of expression vectors. This protocol can be completed in 9-11 d.

Indexed as

Peptide LibraryAnimalsBase SequenceCloning, MolecularEscherichia coliGenetic VectorsHumansPlasmidsProtein EngineeringRecombinant ProteinsTranscription FactorsZinc FingersPeptide LibraryRecombinant ProteinsTranscription Factors

Identifiers

PMID20360772
PMCPMC2855653

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.