Evidence map›Paper›PMID 20360008›Full record

ArticleThe Journal of biological chemistry2010

RecN is a cohesin-like protein that stimulates intermolecular DNA interactions in vitro.

Emigdio D Reyes, Praveen L Patidar, Lee A Uranga, Angelina S Bortoletto, Shelley L Lusetti

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
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  8. SMC protein RecN drives RecA filament translocation for in vivo homology search.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
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  11. Article
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  15. A Decade of Biochemical and Structural Studies of the DNA Repair Machinery ofComputational and structural biotechnology journal · 2016
    Review
  16. Exploratory Investigation ofFrontiers in microbiology · 2016
    Article
  17. An Overview of the Molecular Mechanisms of Recombinational DNA Repair.Cold Spring Harbor perspectives in biology · 2015
    Review
  18. Article
  19. Article
  20. MukBEF, a chromosomal organizer.Journal of molecular microbiology and biotechnology · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emigdio D ReyesDepartment of Chemistry and Biochemistry, New Mexico State University, Las Cruces, New Mexico 88003, USA.
Praveen L Patidar
Lee A Uranga
Angelina S Bortoletto
Shelley L Lusetti
New Mexico State University · US

Funding

ZUNI HEALTH INITIATIVE-PILOT STUDYP20RR016480 · NCRR · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI FENG, CHANGJIAN · 2001 to 2011
$33.7M
UNDERGRADUATE RESEARCH AND TRAININGP20RR016464 · NCRR · UNIVERSITY OF NEVADA RENO · PI PIZZORNO, GIUSEPPE · 2001 to 2011
$30.3M
RISE PROGRAM AT NEW MEXICO STATE UNIVERSITYR25GM061222 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI HOUSTON, JESSICA PEREA, REDDI, LAKSHMI · 2000 to 2022
$21.3M
Structure and Function of Bacterial RecN ProteinSC2GM083697 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI LUSETTI, SHELLEY · 2009 to 2011
$435k
Biochemical Characteristics of the RecN Protein in DNA Repair MechanismsF31GM090483 · NIGMS · NEW MEXICO STATE UNIVERSITY LAS CRUCES · PI REYES, EMIGDIO D. · 2010 to 2011
$56k
Howard Hughes Medical InstituteNCRR NIH HHS P20 RR016464NCRR NIH HHS P20 RR016480NIGMS NIH HHS F31 GM090483NIGMS NIH HHS GM083697NIGMS NIH HHS R25 GM06122NIGMS NIH HHS R25 GM061222NIGMS NIH HHS SC2 GM083697
6 · The paper itself

Abstract

The bacterial RecN protein is involved in the recombinational repair of DNA double-stranded breaks, and recN mutants are sensitive to DNA-damaging agents. Little is known about the biochemical function of RecN. Protein sequence analysis suggests that RecN is related to the SMC (structural maintenance of chromosomes) family of proteins, predicting globular N- and C-terminal domains connected by an extensive coil-coiled domain. The N- and C-domains contain the nucleotide-binding sequences Walker A and Walker B, respectively. We have purified the RecN protein from Deinococcus radiodurans and characterized its DNA-dependent and DNA-independent ATPase activity. The RecN protein hydrolyzes ATP with a k(cat) of 24 min(-1), and this rate is stimulated 4-fold by duplex DNA but not by single-stranded DNA. This DNA-dependent ATP turnover rate exhibits a dependence on the concentration of RecN protein, suggesting that RecN-RecN interactions are required for efficient ATP hydrolysis, and those interactions are stabilized only by duplex DNA. Finally, we show that RecN stimulates the intermolecular ligation of linear DNA molecules in the presence of DNA ligase. This DNA bridging activity is strikingly similar to that of the cohesin complex, an SMC family member, to which RecN is related.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsCloning, MolecularComputer SimulationDeinococcusDimerizationDNADNA, BacterialDNA Restriction EnzymesDNA, Single-StrandedGenome, BacterialHydrolysisIn Vitro TechniquesKineticsModels, BiologicalModels, GeneticAdenosine TriphosphatasesBacterial ProteinsDNADNA, BacterialDNA Restriction EnzymesDNA, Single-StrandedRecN protein, Bacteria

Identifiers

PMID20360008
PMCPMC2878014
OpenAlexW2121183244

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.