Evidence map›Paper›PMID 20354196›Full record

ArticleThe Plant cell2010

F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression.

Antoine Baudry, Shogo Ito, Young Hun Song, Alexander A Strait, Takatoshi Kiba, Sheen Lu, Rossana Henriques, José L Pruneda-Paz, Nam-Hai Chua, Elaine M Tobin and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed, 1 pooled it
25.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed, 1 synthesis or guideline pooled it, 251 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Nature's Master of Ceremony: TheNpj biological timing and sleep · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Agrobacterium-mediated transformation of B. juncea reveals that BjuLKP2 functions in plant yellowing.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  15. Article
  16. Article
  17. HOS15-mediated turnover of PRR7 enhances freezing tolerance.bioRxiv : the preprint server for biology · 2024
    Article
  18. Article
  19. Functional Characterization of thePlants (Basel, Switzerland) · 2024
    Article
  20. The interplay between the circadian clock and abiotic stress responses mediated by ABF3 and CCA1/LHY.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article

87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Antoine BaudrySection of Cell and Developmental Biology, Division of Biological Sciences, University of California at San Diego, La Jolla, California 92093, USA.
Shogo Ito
Young Hun Song
Alexander A Strait
Takatoshi Kiba
Sheen Lu
Rossana Henriques
José L Pruneda-Paz
Nam-Hai Chua
Elaine M Tobin
Steve A Kay
Takato Imaizumi
University of Washington · USRockefeller University · USUniversity of California, San Diego · USUniversity of California, Los Angeles · US

Funding

GENETIC ANALYSIS OF CIRCADIAN RHYTHMS IN ARABIDOPSISR01GM056006 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KAY, STEVE A, PRUNEDA-PAZ, JOSE L · 1996 to 2016
$6.0M
LIGHT-RESPONSIVE GENESR01GM044640 · NIGMS · ROCKEFELLER UNIVERSITY · PI CHUA, NAM-HAI · 1991 to 2011
$5.3M
Molecular Mechanisms in the Arabidopsis Circadian ClockR01GM067837 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KAY, STEVE A · 2003 to 2015
$4.7M
Molecular Mechanisms in the Arabidopsis Circadian ClockR37GM067837 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI STEVE A KAY · 2017 to 2026
$4.4M
Molecular Mechanisms of Seasonal Time MeasurementR01GM079712 · NIGMS · UNIVERSITY OF WASHINGTON · PI IMAIZUMI, TAKATO · 2007 to 2022
$3.5M
Light Responsive GenesR56GM044640 · NIGMS · ROCKEFELLER UNIVERSITY · PI CHUA, NAM-HAI · 2007 to 2007
$542k
NIGMS NIH HHS GM044640NIGMS NIH HHS GM056006NIGMS NIH HHS GM067837NIGMS NIH HHS GM079712NIGMS NIH HHS R01 GM044640NIGMS NIH HHS R01 GM056006NIGMS NIH HHS R01 GM067837NIGMS NIH HHS R01 GM079712NIGMS NIH HHS R37 GM067837NIGMS NIH HHS R56 GM044640
6 · The paper itself

Abstract

Regulation of protein turnover mediated by ZEITLUPE (ZTL) constitutes an important mechanism of the circadian clock in Arabidopsis thaliana. Here, we report that FLAVIN BINDING, KELCH REPEAT, F-BOX1 (FKF1) and LOV KELCH PROTEIN2 (LKP2) play similar roles to ZTL in the circadian clock when ZTL is absent. In contrast with subtle circadian clock defects in fkf1, the clock in ztl fkf1 has a considerably longer period than in ztl. In ztl fkf1 lkp2, several clock parameters were even more severely affected than in ztl fkf1. Although LATE ELONGATED HYPOCOTYL (LHY) and CIRCADIAN CLOCK ASSOCIATED1 (CCA1) expression levels are lower in ztl than in the wild type, introducing both fkf1 and lkp2 mutations into the ztl mutant dramatically diminished LHY expression without further affecting CCA1 expression. This demonstrates different contributions of ZTL, FKF1, and LKP2 in the regulation of LHY and CCA1 expression. In addition, FKF1 and LKP2 also interacted with TIMING OF CAB EXPRESSION1 (TOC1) and PSEUDO-RESPONSE REGULATOR5 (PRR5), and both proteins were further stabilized in ztl fkf1 and ztl fkf1 lkp2 compared with in ztl. Our results indicate that ZTL, FKF1, and LKP2 together regulate TOC1 and PRR5 degradation and are major contributors to determining the period of circadian oscillation and enhancing robustness.

Indexed as

ArabidopsisArabidopsis ProteinsBiological ClocksDNA, PlantGene Expression Regulation, PlantGenetic Complementation TestMutationTranscription FactorsArabidopsis ProteinsDNA, PlantFKF1 protein, ArabidopsisLKP2 protein, ArabidopsisPRR5 protein, ArabidopsisTOC1 protein, ArabidopsisTranscription FactorsZTL protein, Arabidopsis

Identifiers

PMID20354196
PMCPMC2861467
OpenAlexW2113878162

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.