Evidence map›Paper›PMID 20351243›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Structural basis for solute transport, nucleotide regulation, and immunological recognition of Neisseria meningitidis PorB.

Mikio Tanabe, Crina M Nimigean, T M Iverson

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

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  6. PathogenicInfection and immunity · 2022
    Article
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  9. A fully automated crystallization apparatus for small protein quantities.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Mikio TanabeDepartment of Pharmacology, Vanderbilt University Medical Center, Nashville, TN 37232-6600, USA.
Crina M Nimigean
T M Iverson
Vanderbilt University Medical Center · USCornell University · US

Funding

ZINC FINGER-DNA COMPLEXP41RR001646 · NCRR · CORNELL UNIVERSITY ITHACA · PI CINGOLANI, GINO · 1985 to 2011
$23.8M
MECHANISM OF ION CHANNEL MODULATION BY LIGANDSR01GM077560 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI NIMIGEAN, CRINA M · 2007 to 2011
$1.9M
Complexities of complex II: A versatile architecture for respirationR01GM079419 · NIGMS · VANDERBILT UNIVERSITY · PI IVERSON, T M · 2007 to 2011
$1.3M
Overcoming the Barriers to Structural Analysis of GPCRsR01GM081816 · NIGMS · VANDERBILT UNIVERSITY · PI SANDERS, CHARLES R · 2007 to 2009
$966k
NCRR NIH HHS P41 RR001646NCRR NIH HHS RR-01646NIGMS NIH HHS DMR-0225180NIGMS NIH HHS GM079419NIGMS NIH HHS GM081816NIGMS NIH HHS R01 GM077560NIGMS NIH HHS R01 GM079419NIGMS NIH HHS R01 GM081816
6 · The paper itself

Abstract

PorB is the second most prevalent outer membrane protein in Neisseria meningitidis. PorB is required for neisserial pathogenesis and can elicit a Toll-like receptor mediated host immune response. Here, the x-ray crystal structure of PorB has been determined to 2.3 A resolution. Structural analysis and cocrystallization studies identify three putative solute translocation pathways through the channel pore: One pathway transports anions nonselectively, one transports cations nonselectively, and one facilitates the specific uptake of sugars. During infection, PorB likely binds host mitochondrial ATP, and cocrystallization with the ATP analog AMP-PNP suggests that binding of nucleotides regulates these translocation pathways both by partial occlusion of the pore and by restricting the motion of a putative voltage gating loop. PorB is located on the surface of N. meningitidis and can be recognized by receptors of the host innate immune system. Features of PorB suggest that Toll-like receptor mediated recognition outer membrane proteins may be initiated with a nonspecific electrostatic attraction.

Indexed as

AnionsBacterial Outer Membrane ProteinsBiological TransportCarbohydratesCrystallography, X-RayHumansImmunity, InnateLiposomesModels, MolecularMolecular ConformationNeisseria meningitidisNucleotidesPorinsToll-Like ReceptorsAnionsBacterial Outer Membrane ProteinsCarbohydratesLiposomesNucleotidesporin protein, NeisseriaPorinsToll-Like Receptors

Identifiers

PMID20351243
PMCPMC2872391
OpenAlexW1970037428

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.