Evidence map›Paper›PMID 20350193›Full record

ArticleThe Journal of infectious diseases2010

Common polymorphisms in the NOD2 gene region are associated with leprosy and its reactive states.

William Richard Berrington, Murdo Macdonald, Saraswoti Khadge, Bishwa Raj Sapkota, Marta Janer, Deanna Alisa Hagge, Gilla Kaplan, Thomas Richard Hawn

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 95 citations in OpenAlex.

  1. Pleiotropic effects for Parkin and LRRK2 in leprosy type-1 reactions and Parkinson's disease.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Trial
  2. Serum Neurofilament Light Chain Levels in Leprosy Patients: A Cross-Sectional Study.Tropical medicine & international health : TM & IH · 2026
    Observational
  3. Article
  4. Leprosy.Nature reviews. Disease primers · 2024
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Mice Dually Disrupted forFrontiers in immunology · 2022
    Article
  11. Offense and Defense in Granulomatous Inflammation Disease.Frontiers in cellular and infection microbiology · 2022
    Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Human genetics of mycobacterial disease.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

William Richard BerringtonDept of Medicine, University of Washington School of Medicine, 1959 NE Pacific St, Box 356523, Seattle, WA 98195, USA. berring@u.washington.edu
Murdo Macdonald
Saraswoti Khadge
Bishwa Raj Sapkota
Marta Janer
Deanna Alisa Hagge
Gilla Kaplan
Thomas Richard Hawn
Anandaban Hospital · NPUniversity of Washington · USInstitute for Systems Biology · US

Funding

Regulation of Early Cytokine Receptors to TB InfectionR01AI054361 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI KAPLAN, GILLA · 2002 to 2006
$1.9M
PATHOBIOLOGY OF LEPROSYR01AI022616 · NIAID · ROCKEFELLER UNIVERSITY · PI KAPLAN, GILLA · 1989 to 2002
$1.1M
The Role of Nod1 and Nod2 in the Pathogeneisis of Legionella Pneumophila PneumoniK08AI080952 · NIAID · UNIVERSITY OF WASHINGTON · PI BERRINGTON, WILLIAM RICHARD · 2009 to 2012
$623k
PATHOBIOLOGY OF HUMAN LEPROSYR22AI022616 · NIAID · ROCKEFELLER UNIVERSITY · PI KAPLAN, GILLA · 1986 to 1991
–
NIAID NIH HHS AI 22616NIAID NIH HHS AI 54361NIAID NIH HHS K08 AI080952NIAID NIH HHS L30 AI075827NIAID NIH HHS R01 AI054361
6 · The paper itself

Abstract

backgroundBecause of its wide spectrum of clinical manifestations and its well-defined immunological complications, leprosy is a useful disease for studying genetic regulation of the host response to infection. We hypothesized that polymorphisms in the nucleotide-binding oligomerization domain containing 2 (NOD2) gene, for a cytosolic receptor known to detect mycobacteria, are associated with susceptibility to leprosy and its clinical outcomes.

methodsWe used a case-control study design with 933 patients in Nepal. Our study included 240 patients with type 1 (reversal) reactions and 124 patients with type 2 (erythema nodosum leprosum) reactions. We compared the frequencies of 32 common polymorphisms in the NOD2 gene region between patients with the different clinical types of leprosy as well as between the patients and 101 control participants without leprosy.

resultsFour polymorphisms were associated with susceptibility to leprosy when comparing allele frequencies, and 8 were associated when comparing genotype frequencies with a dominant model. Five polymorphisms were associated with protection from reversal reaction in an allelic analysis, and 7 were associated with reversal reaction with a dominant model. Four polymorphisms were associated with increased susceptibility to erythema nodosum leprosum in an allelic analysis, whereas 7 of 32 polymorphisms were associated with a dominant model.

conclusionThese data suggest that NOD2 genetic variants are associated with susceptibility to leprosy and the development of leprosy reactive states.

Indexed as

AdultAllelesCase-Control StudiesErythema NodosumFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHaplotypesHumansLeprosyLeprosy, LepromatousMaleMiddle AgedNepalNod2 Signaling Adaptor ProteinNOD2 protein, humanNod2 Signaling Adaptor Protein

Identifiers

PMID20350193
PMCPMC2853728
OpenAlexW2141704175

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.