Evidence map›Paper›PMID 20348252›Full record

ArticleJournal of bacteriology2010

The sigma factor AlgU plays a key role in formation of robust biofilms by nonmucoid Pseudomonas aeruginosa.

Alexis Bazire, Kouki Shioya, Emmanuelle Soum-Soutéra, Emeline Bouffartigues, Cynthia Ryder, Linda Guentas-Dombrowsky, Gaëlle Hémery, Isabelle Linossier, Sylvie Chevalier, Daniel J Wozniak and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 70 citations in OpenAlex.

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  8. Spatial heterogeneity in biofilm metabolism elicited by local control of phenazine methylation.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  9. Transcriptional Regulators Controlling Virulence inInternational journal of molecular sciences · 2023
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  10. Boolean model of the gene regulatory network ofFrontiers in microbiology · 2023
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  11. Article
  12. Pseudomonas aeruginosa Biofilm Dispersion by the Human Atrial Natriuretic Peptide.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
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  13. Article
  14. Alterocin, an Antibiofilm Protein Secreted byApplied and environmental microbiology · 2020
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  16. The Temperature-Regulation ofFrontiers in microbiology · 2020
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  17. Membrane-Interactive Compounds FromFrontiers in microbiology · 2020
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Alexis BazireLaboratoire de Biotechnologie et Chimie Marines, EA 3884, Université de Bretagne-Sud (UEB), Lorient, France.
Kouki Shioya
Emmanuelle Soum-Soutéra
Emeline Bouffartigues
Cynthia Ryder
Linda Guentas-Dombrowsky
Gaëlle Hémery
Isabelle Linossier
Sylvie Chevalier
Daniel J Wozniak
Olivier Lesouhaitier
Alain Dufour
Laboratoire de Biotechnologie et Chimie Marines · FRUniversité de Rouen Normandie · FRThe Ohio State University · USUniversité de Bretagne Sud · FR

Funding

CONTROL OF PSEUDOMONAS AERUGINOSA ALGD TRANSCRIPTIONR01HL058334 · NHLBI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI WOZNIAK, DANIEL J · 1996 to 2012
$2.5M
The matrix of Pseudomonas aeruginosa biofilmsR01AI061396 · NIAID · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI WOZNIAK, DANIEL J · 2005 to 2009
$2.1M
The matrix of Pseudomonas aeruginosa biofilmsR56AI061396 · NIAID · OHIO STATE UNIVERSITY · PI WOZNIAK, DANIEL J · 2010 to 2010
$595k
The matrix of Pseudomonas aeruginosa biofilmsR21AI061396 · NIAID · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI WOZNIAK, DANIEL J · 2004 to 2004
$329k
NHLBI NIH HHS HL058334NHLBI NIH HHS R01 HL058334NIAID NIH HHS AI061396NIAID NIH HHS R01 AI061396NIAID NIH HHS R21 AI061396NIAID NIH HHS R56 AI061396
6 · The paper itself

Abstract

The extracytoplasmic function sigma factor AlgU of Pseudomonas aeruginosa is responsible for alginate overproduction, leading to mucoidy and chronic infections of cystic fibrosis patients. We investigated here the role of AlgU in the formation of nonmucoid biofilms. The algU mutant of P. aeruginosa PAO1 (PAOU) showed a dramatic impairment in biofilm formation under dynamic conditions. PAOU was defective both in cell attachment to glass and in development of robust, shear-resistant biofilms. This was explained by an impaired production of extracellular matrix, specifically of the exopolysaccharide Psl, as revealed by microscopy and enzyme-linked immunosorbent assay. Complementing the algU mutation with a plasmid-borne algU gene restored wild-type phenotypes. Compared with that in PAO1, expression of the psl operon was reduced in the PAOU strain, and the biofilm formation ability of this strain was partially restored by inducing the transcription of the psl operon. Furthermore, expression of the lectin-encoding lecA and lecB genes was reduced in the PAOU strain. In agreement with the requirement of LecB for type IV pilus biogenesis, PAOU displayed impaired twitching motility. Collectively, these genetic downregulation events explain the biofilm formation defect of the PAOU mutant. Promoter mapping indicated that AlgU is probably not directly responsible for transcription of the psl operon and the lec genes, but AlgU is involved in the expression of the ppyR gene, whose product was reported to positively control psl expression. Expressing the ppyR gene in PAOU partially restored the formation of robust biofilms.

Indexed as

Bacterial ProteinsBiofilmsGene Expression Regulation, BacterialLectinsMutationPolysaccharides, BacterialPromoter Regions, GeneticPseudomonas aeruginosaSigma FactorAlgU protein, Pseudomonas aeruginosaBacterial Proteinsexopolysaccharide, PseudomonasLectinsPolysaccharides, BacterialSigma Factor

Identifiers

PMID20348252
PMCPMC2901682
OpenAlexW2116013922

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.