Evidence map›Paper›PMID 20340133›Full record

ArticleProtein science : a publication of the Protein Society2010

Increasing protein stability: importance of DeltaC(p) and the denatured state.

Hailong Fu, Gerald Grimsley, J Martin Scholtz, C Nick Pace

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Advanced protein formulations.Protein science : a publication of the Protein Society · 2015
    Review
  8. Article
  9. Article
  10. Residual structure in unfolded proteins.Current opinion in structural biology · 2012
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hailong FuDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, Texas 77843, USA.
Gerald Grimsley
J Martin Scholtz
C Nick Pace
Texas A&M Health Science Center · USTexas A&M University · US

Funding

ENERGETICS AND MECHANISM OF FOLDING OF RIBONUCLEASE T1R01GM037039 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI PACE, CARLOS N · 1986 to 2006
$1.6M
LOCAL AND LONG RANGE INTERACTIONS IN PROTEIN FOLDINGR01GM052483 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SCHOLTZ, J. MARTIN · 2001 to 2004
$806k
HIERARCHY OF PROTEIN FOLDING AND STABILITYR29GM052483 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI SCHOLTZ, J. MARTIN · 1995 to 1999
–
NIGMS NIH HHS GM 37039NIGMS NIH HHS GM 52483
6 · The paper itself

Abstract

Increasing the conformational stability of proteins is an important goal for both basic research and industrial applications. In vitro selection has been used successfully to increase protein stability, but more often site-directed mutagenesis is used to optimize the various forces that contribute to protein stability. In previous studies, we showed that improving electrostatic interactions on the protein surface and improving the beta-turn sequences were good general strategies for increasing protein stability, and used them to increase the stability of RNase Sa. By incorporating seven of these mutations in RNase Sa, we increased the stability by 5.3 kcal/mol. Adding one more mutation, D79F, gave a total increase in stability of 7.7 kcal/mol, and a melting temperature 28 degrees C higher than the wild-type enzyme. Surprisingly, the D79F mutation lowers the change in heat capacity for folding, DeltaC(p), by 0.6 kcal/mol/K. This suggests that this mutation stabilizes structure in the denatured state ensemble. We made other mutants that give some insight into the structure present in the denatured state. Finally, the thermodynamics of folding of these stabilized variants of RNase Sa are compared with those observed for proteins from thermophiles.

Indexed as

BacteriaCircular DichroismEscherichia coliGuanidineHydrogen-Ion ConcentrationModels, MolecularMutagenesis, Site-DirectedProtein ConformationProtein DenaturationProtein FoldingProtein StabilityRecombinant ProteinsRibonucleasesSodium ChlorideThermodynamicsUreaGuanidineRecombinant ProteinsRibonucleasesribonuclease Sa3Sodium ChlorideUrea

Identifiers

PMID20340133
PMCPMC2868246
OpenAlexW2063847506

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.