Evidence map›Paper›PMID 20339547›Full record

ArticlePloS one2010

A live zebrafish-based screening system for human nuclear receptor ligand and cofactor discovery.

Jens Tiefenbach, Pamela R Moll, Meryl R Nelson, Chun Hu, Lilia Baev, Thomas Kislinger, Henry M Krause

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Endocrine regulation of multichromatic color vision.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  7. Article
  8. Obese zebrafish: A small fish for a major human health condition.Animal models and experimental medicine · 2018
    Review
  9. Idebenone and coenzyme QDisease models & mechanisms · 2018
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. ZEBRAFISH AS AN IN VIVO MODEL FOR SUSTAINABLE CHEMICAL DESIGN.Green chemistry : an international journal and green chemistry resource : GC · 2016
    Article
  15. Article
  16. Halogenated bisphenol-A analogs act as obesogens in zebrafish larvae (Danio rerio).Toxicological sciences : an official journal of the Society of Toxicology · 2014
    Article
  17. Article
  18. Article
  19. Transgenic retinoic acid sensor lines in zebrafish indicate regions of available embryonic retinoic acid.Developmental dynamics : an official publication of the American Association of Anatomists · 2013
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jens TiefenbachBanting and Best Department of Medical Research, The Terrence Donnelly Centre for Cellular and Biomolecular Research (CCBR), University of Toronto, Toronto, Ontario, Canada.
Pamela R Moll
Meryl R Nelson
Chun Hu
Lilia Baev
Thomas Kislinger
Henry M Krause
University of Toronto · CAOntario Institute for Cancer Research · CA

Funding

Canadian Institutes of Health Research
6 · The paper itself

Abstract

Nuclear receptors (NRs) belong to a superfamily of transcription factors that regulate numerous homeostatic, metabolic and reproductive processes. Taken together with their modulation by small lipophilic molecules, they also represent an important and successful class of drug targets. Although many NRs have been targeted successfully, the majority have not, and one third are still orphans. Here we report the development of an in vivo GFP-based reporter system suitable for monitoring NR activities in all cells and tissues using live zebrafish (Danio rerio). The human NR fusion proteins used also contain a new affinity tag cassette allowing the purification of receptors with bound molecules from responsive tissues. We show that these constructs 1) respond as expected to endogenous zebrafish hormones and cofactors, 2) facilitate efficient receptor and cofactor purification, 3) respond robustly to NR hormones and drugs and 4) yield readily quantifiable signals. Transgenic lines representing the majority of human NRs have been established and are available for the investigation of tissue- and isoform-specific ligands and cofactors.

Indexed as

Genetic TechniquesLigandsAnimalsBase SequenceChromatography, AffinityGene Expression Regulation, DevelopmentalGreen Fluorescent ProteinsHormonesHumansMolecular Sequence DataPlasmidsProtein IsoformsReceptors, Cytoplasmic and NuclearTransfectionZebrafishGreen Fluorescent ProteinsHormonesLigandsProtein IsoformsReceptors, Cytoplasmic and Nuclear

Identifiers

PMID20339547
PMCPMC2842432
OpenAlexW2063046546

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.