Evidence map›Paper›PMID 20337967›Full record

ArticlePediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology2010

Cord blood molecular biomarkers of eosinophilopoiesis: kinetic analysis of GATA-1, MBP1 and IL-5R alpha mRNA expression.

Anne K Ellis, Steven J Ackerman, Lynn Crawford, Jian Du, Richa Bedi, Judah A Denburg

Open access · greenAbstract read
In one paragraph

Article in Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Anne K EllisDivision of Clinical Immunology and Allergy, Department of Medicine, McMaster University, Hamilton, ON, Canada.
Steven J Ackerman
Lynn Crawford
Jian Du
Richa Bedi
Judah A Denburg
University of Illinois Chicago · USMcMaster University · CAQueen's University · CA

Funding

CYTOKINE REGULATION OF HUMAN EOSINOPHIL GENESR01AI033043 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI ACKERMAN, STEVEN JULES · 1992 to 2006
$2.2M
Training--Signal Transduction and Cellular EndocrinologyT32DK007739 · NIDDK · UNIVERSITY OF ILLINOIS AT CHICAGO · PI ACKERMAN, STEVEN JULES · 1997 to 2011
$1.5M
CIHRNIAID NIH HHS R01 AI033043NIAID NIH HHS R01AI33043NIDDK NIH HHS T32 DK007739
6 · The paper itself

Abstract

Eosinophil/basophil (Eo/B) progenitor phenotype and function in cord blood (CB) are associated with atopic risk at birth and infant clinical outcomes. Molecular analyses of eosinophil-basophil differentiation events could identify clinically predictive biomarkers. To determine CB kinetic patterns of Eo/B lineage-associated gene expression (GATA-1, MBP1 and IL-5R alpha) after IL-5 stimulation, CB non-adherent mononuclear cells were isolated from random fresh and frozen samples and incubated in the presence of recombinant human interleukin-5. Some underwent CD34+ positive selection using magnetic cell separation. At various time-points, mRNA expression of GATA-1, MBP1 and IL-5R alpha (total transcripts) was determined utilizing multiplex quantitative polymerase chain reaction (Q-PCR). Relative expression levels of the IL-5R alpha soluble vs. transmembrane isoforms were also analyzed. Stimulation of the non-adherent mononuclear cells with IL-5 resulted in early up-regulation of GATA-1, peaking at 48 h, followed by decreasing expression and down-regulation by 96 h. The CD34+ enriched population demonstrated an equivalent expression pattern (r = 0.963, p = 0.0349). MBP1 mRNA expression [non-adherent mononuclear cells (NAMNCs) and CD34+ alike; r = 0.988, p = 0.012] was slowly up-regulated in response to IL-5, maximal at 96 h. Total IL-5R alpha expression appeared stable over the time-course, mediated by differential expression of the soluble and transmembrane isoforms (i.e., initial increase in the transmembrane contribution followed by a predominance of the soluble isoform by 48-72 h). Multiplex Q-PCR analysis of mRNA from CB demonstrates expression of critical eosinophil-basophil lineage-specific events that are consistent with current understanding of eosinophil differentiation and maturation. The non-adherent mononuclear cell population provides a surrogate signal for the CD34+ progenitor population.

Indexed as

Antigens, CD34BiomarkersCells, CulturedDNA-Binding ProteinsEosinophilsFetal BloodGATA1 Transcription FactorGene Expression RegulationHematopoiesisHumansInfant, NewbornInterleukin-5Interleukin-5 Receptor alpha SubunitRNA, MessengerTime FactorsAntigens, CD34BiomarkersDENND4A protein, humanDNA-Binding ProteinsGATA1 protein, humanGATA1 Transcription FactorIL5RA protein, humanInterleukin-5Interleukin-5 Receptor alpha SubunitRNA, Messenger

Identifiers

PMID20337967
PMCPMC10411049
OpenAlexW2139569588

What OpenQuestion holds

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LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.