Evidence map›Paper›PMID 20333172›Full record

ArticleGenome biology and evolution2009

Independent mammalian genome contractions following the KT boundary.

Mina Rho, Mo Zhou, Xiang Gao, Sun Kim, Haixu Tang, Michael Lynch

Abstract read
In one paragraph

Article in Genome biology and evolution, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Evolutionary diversification of the multimeric states of proteins.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  6. Widespread recurrent evolution of genomic features.Genome biology and evolution · 2012
    Review
  7. Article
  8. The repatterning of eukaryotic genomes by random genetic drift.Annual review of genomics and human genetics · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Mina RhoSchool of Informatics, Indiana University, Bloomington, IN, USA.
Mo Zhou
Xiang Gao
Sun Kim
Haixu Tang
Michael Lynch

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although it is generally accepted that major changes in the earth's history are significant drivers of phylogenetic diversification and extinction, such episodes may also have long-lasting effects on genomic architecture. Here we show that widespread reductions in genome size have occurred in multiple lineages of mammals subsequent to the Cretaceous-Tertiary (KT) boundary, whereas there is no evidence for such changes in other vertebrate, invertebrate, or land plant lineages. Although the mechanisms remain unclear, such shifts in mammalian genome evolution may be a consequence of an increase in the efficiency of selection against excess DNA resulting from post-KT population size expansions. Independent historical changes in genome architecture in diverse lineages raise a significant challenge to the idea that genome size is finely tuned to achieve adaptive phenotypic modifications and suggest that attempts to use phylogenetic analysis to infer ancestral genome sizes may be problematical.

Indexed as

genome evolutiongenome sizeKT boundarymammalian evolutionmobile elementspseudogenesretrotransposons

Identifiers

PMID20333172
PMCPMC2817402

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.