Evidence map›Paper›PMID 20308586›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Combinatorial libraries against libraries for selecting neoepitope activation-specific antibodies.

Xuebo Hu, Sungkwon Kang, Craig Lefort, Minsoo Kim, Moonsoo M Jin

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

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  13. Cross-domain inhibition of TACE ectodomain.Proceedings of the National Academy of Sciences of the United States of America · 2011
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Xuebo HuDepartment of Biomedical Engineering, Cornell University, Ithaca, NY 14853, USA.
Sungkwon Kang
Craig Lefort
Minsoo Kim
Moonsoo M Jin
Cornell University · USUniversity of Rochester Medical Center · US

Funding

LFA-1 in Lymphocyte MigrationR01HL087088 · NHLBI · UNIVERSITY OF ROCHESTER · PI KIM, MINSOO · 2007 to 2015
$3.8M
NHLBI NIH HHS R01 HL087088
6 · The paper itself

Abstract

A systematic approach to the discovery of conformation-specific antibodies or those that recognize activation-induced neoepitopes in signaling molecules and enzymes will be a powerful tool in developing antibodies for basic science and therapy. Here, we report the isolation of antibody antagonists that preferentially bind activated integrin Mac-1 (alpha(M)beta(2)) and are potent in blocking neutrophil adhesion and migration. A novel strategy was developed for this task, consisting of yeast surface display of Mac-1 inserted (I) domain library, directed evolution to isolate active mutants of the I domain, and screening of phage display of human antibody library against the active I domain in yeast. Enriched antibody library was then introduced into yeast surface two-hybrid system for final quantitative selection of antibodies from monomeric antigen-antibody interaction. This led to highly efficient isolation of intermediate to high affinity antibodies, which preferentially reacted with the active I domain, antagonized the I domain binding to intercellular adhesion molecule (ICAM)-1, complement C3 fragment iC3b, and fibronectin, and potently inhibited neutrophil migration on fibrinogen. The strategy demonstrated herein can be broadly applicable to developing antibodies against modular domains that switch between inactive and active conformations, particularly toward the discovery of antibody antagonists in therapeutic and diagnostic applications.

Indexed as

Antibody SpecificityPeptide LibraryCell AdhesionCell MovementEpitopesHumansLigandsMacrophage-1 AntigenNeutrophil ActivationNeutrophilsSaccharomyces cerevisiaeEpitopesLigandsMacrophage-1 AntigenPeptide Library

Identifiers

PMID20308586
PMCPMC2851959
OpenAlexW2071849256

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.