Evidence map›Paper›PMID 20308539›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

A genome-scale protein interaction profile of Drosophila p53 uncovers additional nodes of the human p53 network.

Andrea Lunardi, Giulio Di Minin, Paolo Provero, Marco Dal Ferro, Marcello Carotti, Giannino Del Sal, Licio Collavin

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Maternally Instigated Diapause inFrontiers in behavioral neuroscience · 2022
    Review
  12. Regulation and coordination of the different DNA damage responses inFrontiers in cell and developmental biology · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Molecular biology of the cell · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Andrea LunardiLaboratorio Nazionale Consorzio Interuniversitario per le Biotecnologie, Area Science Park, 34012 Trieste, Italy.
Giulio Di Minin
Paolo Provero
Marco Dal Ferro
Marcello Carotti
Giannino Del Sal
Licio Collavin
University of Trieste · ITConsorzio Interuniversitario per le Biotecnologie · ITUniversity of Turin · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genome of the fruitfly Drosophila melanogaster contains a single p53-like protein, phylogenetically related to the ancestor of the mammalian p53 family of tumor suppressors. We reasoned that a comprehensive map of the protein interaction profile of Drosophila p53 (Dmp53) might help identify conserved interactions of the entire p53 family in man. Using a genome-scale in vitro expression cloning approach, we identified 91 previously unreported Dmp53 interactors, considerably expanding the current Drosophila p53 interactome. Looking for evolutionary conservation of these interactions, we tested 41 mammalian orthologs and found that 37 bound to one or more p53-family members when overexpressed in human cells. An RNAi-based functional assay for modulation of the p53 pathway returned five positive hits, validating the biological relevance of these interactions. One p53 interactor is GTPBP4, a nucleolar protein involved in 60S ribosome biogenesis. We demonstrate that GTPBP4 knockdown induces p53 accumulation and activation in the absence of nucleolar disruption. In breast tumors with wild-type p53, increased expression of GTPBP4 correlates with reduced patient survival, emphasizing a potential relevance of this regulatory axis in cancer.

Indexed as

Cloning, MolecularGene Regulatory NetworksGenomeAnimalsCell LineDrosophila melanogasterDrosophila ProteinsEvolution, MolecularGTP-Binding ProteinsHumansNuclear ProteinsProtein BindingTumor Suppressor Protein p53Drosophila ProteinsGTP-Binding ProteinsGTPBP4 protein, humanNuclear Proteinsp53 protein, DrosophilaTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID20308539
PMCPMC2851947
OpenAlexW1989182315

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.