Evidence map›Paper›PMID 20308092›Full record

ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2010

Rate and effects of spontaneous mutations that affect fitness in mutator Escherichia coli.

Sandra Trindade, Lilia Perfeito, Isabel Gordo

Abstract read
In one paragraph

Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. The adaptive state determines the impact of mutations on evolving populations.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Evolutionary Advantage of Cell Size Control.Physical review letters · 2025
    Article
  3. Article
  4. Reversions mask the contribution of adaptive evolution in microbiomes.bioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Article
  7. A Single Nucleotide Change in theApplied and environmental microbiology · 2022
    Article
  8. Article
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  12. Review
  13. Review
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  19. Article
  20. Rates of fitness decline and rebound suggest pervasive epistasis.Evolution; international journal of organic evolution · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sandra TrindadeInstituto Gulbenkian de Ciência, , Rua da Quinta Grande, No. 6, 2780-156 Oeiras, Portugal.
Lilia Perfeito
Isabel Gordo

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Knowledge of the mutational parameters that affect the evolution of organisms is of key importance in understanding the evolution of several characteristics of many natural populations, including recombination and mutation rates. In this study, we estimated the rate and mean effect of spontaneous mutations that affect fitness in a mutator strain of Escherichia coli and review some of the estimation methods associated with mutation accumulation (MA) experiments. We performed an MA experiment where we followed the evolution of 50 independent mutator lines that were subjected to repeated bottlenecks of a single individual for approximately 1150 generations. From the decline in mean fitness and the increase in variance between lines, we estimated a minimum mutation rate to deleterious mutations of 0.005 (+/-0.001 with 95% confidence) and a maximum mean fitness effect per deleterious mutation of 0.03 (+/-0.01 with 95% confidence). We also show that any beneficial mutations that occur during the MA experiment have a small effect on the estimate of the rate and effect of deleterious mutations, unless their rate is extremely large. Extrapolating our results to the wild-type mutation rate, we find that our estimate of the mutational effects is slightly larger and the inferred deleterious mutation rate slightly lower than previous estimates obtained for non-mutator E. coli.

Indexed as

Evolution, MolecularMutationComputer SimulationEscherichia coliGenetic FitnessGenetic VariationModels, GeneticMonte Carlo Method

Identifiers

PMID20308092
PMCPMC2871818

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.