Evidence map›Paper›PMID 20308063›Full record

ArticleThe Journal of biological chemistry2010

Ion-dependent polymerization differences between mammalian beta- and gamma-nonmuscle actin isoforms.

Sarah E Bergeron, Mei Zhu, Suzanne M Thiem, Karen H Friderici, Peter A Rubenstein

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 115 citations in OpenAlex.

  1. Article
  2. The Baraitser-Winter Cerebrofrontofacial Syndrome Recurrent R196H Variant in Cytoplasmic β-Actin Impairs Its Cellular Polymerization and Stability.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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  15. A solution to the long-standing problem of actin expression and purification.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Review
  17. Review
  18. Article
  19. The Cytoplasmic Actins in the Regulation of Endothelial Cell Function.International journal of molecular sciences · 2021
    Review
  20. Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sarah E BergeronDepartment of Biochemistry, Roy A and Lucille A Carver College of Medicine, University of Iowa, Iowa City, Iowa 52242, USA.
Mei Zhu
Suzanne M Thiem
Karen H Friderici
Peter A Rubenstein
Michigan State University · USUniversity of Iowa · US

Funding

Autosomal Dominant Hearing LossR01DC004568 · NIDCD · MICHIGAN STATE UNIVERSITY · PI FRIDERICI, KAREN H. · 2001 to 2009
$2.4M
Biochemical consequences of Deafness-causing actin mutationsR01DC008803 · NIDCD · UNIVERSITY OF IOWA · PI RUBENSTEIN, PETER A. · 2008 to 2012
$1.8M
Biochemical Consequences of Deafness-causing Actin MutationsR55DC008803 · NIDCD · UNIVERSITY OF IOWA · PI RUBENSTEIN, PETER A. · 2007 to 2007
$100k
NIDCD NIH HHS DC004568NIDCD NIH HHS DC008803NIDCD NIH HHS R01 DC004568NIDCD NIH HHS R01 DC008803NIDCD NIH HHS R55 DC008803
6 · The paper itself

Abstract

beta- and gamma-nonmuscle actins differ by 4 amino acids at or near the N terminus and distant from polymerization interfaces. beta-Actin contains an Asp(1)-Asp(2)-Asp(3) and Val(10) whereas gamma-actin has a Glu(1)-Glu(2)-Glu(3) and Ile(10). Despite these small changes, conserved across mammals, fish, and birds, their differential localization in the same cell suggests they may play different roles reflecting differences in their biochemical properties. To test this hypothesis, we established a baculovirus-driven expression system for producing these actins in isoform-pure populations although contaminated with 20-25% insect actin. Surprisingly, Ca-gamma-actin exhibits a slower monomeric nucleotide exchange rate, a much longer nucleation phase, and a somewhat slower elongation rate than beta-actin. In the Mg-form, this difference between the two is much smaller. Ca-gamma-actin depolymerizes half as fast as does beta-actin. Mixing experiments with Ca-actins reveal the two will readily co-polymerize. In the Ca-form, phosphate release from polymerizing beta-actin occurs much more rapidly and extensively than polymerization, whereas phosphate release lags behind polymerization with gamma-actin. Phosphate release during treadmilling is twice as fast with beta- as with gamma-actin. With Mg-actin in the initial stages, phosphate release for both actins correlates much more closely with polymerization. Calcium bound in the high affinity binding site of gamma-actin may cause a selective energy barrier relative to beta-actin that retards the equilibration between G- and F-monomer conformations resulting in a slower polymerizing actin with greater filament stability. This difference may be particularly important in sites such as the gamma-actin-rich cochlear hair cell stereocilium where local mm calcium concentrations may exist.

Indexed as

ActinsAmino Acid MotifsAnimalsCalciumCell LineHumansIonsMagnesiumPhosphatesProtein IsoformsProtein MultimerizationProtein Structure, QuaternarySpodopteraActinsCalciumIonsMagnesiumPhosphatesProtein Isoforms

Identifiers

PMID20308063
PMCPMC2871477
OpenAlexW2046374433

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.