Evidence map›Paper›PMID 20307292›Full record

ArticleBMC biotechnology2010

Phenotypic analysis of images of zebrafish treated with Alzheimer's gamma-secretase inhibitors.

Dilyara Arslanova, Ting Yang, Xiaoyin Xu, Stephen T Wong, Corinne E Augelli-Szafran, Weiming Xia

Open access · goldAbstract read
In one paragraph

Article in BMC biotechnology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens.Toxicological sciences : an official journal of the Society of Toxicology · 2019
    Article
  8. ErbB2 regulates autophagic flux to modulate the proteostasis of APP-CTFs in Alzheimer's disease.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  9. Article
  10. Review
  11. Article
  12. Polycystin-1 cleavage and the regulation of transcriptional pathways.Pediatric nephrology (Berlin, Germany) · 2014
    Review
  13. Article
  14. Review
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Dilyara ArslanovaCenter for Neurologic Diseases, Department of Neurology, Brigham and Women's Hospital, Harvard Medical School, Harvard University, Boston, MA, USA.
Ting Yang
Xiaoyin Xu
Stephen T Wong
Corinne E Augelli-Szafran
Weiming Xia
Brigham and Women's Hospital · USHarvard University · USMethodist Hospital · US

Funding

TRANSGENICS AND PRESENILIN FUNCTIONP01AG015379 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI BEREZOVSKA, OKSANA, SELKOE, DENNIS J · 1998 to 2023
$51.3M
NIA NIH HHS AG015379
6 · The paper itself

Abstract

backgroundSeveral gamma-secretase inhibitors (GSI) are in clinical trials for the treatment of Alzheimer's disease (AD). This enzyme mediates the proteolytic cleavage of amyloid precursor protein (APP) to generate amyloid beta protein, Abeta, the pathogenic protein in AD. The gamma-secretase also cleaves Notch to generate Notch Intracellular domain (NICD), the signaling molecule that is implicated in tumorigenesis.

resultsWe have developed a method to examine live zebrafish that were each treated with gamma-secretase inhibitors (GSI), DAPT {N- [N-(3,5-Difluorophenacetyl-L-alanyl)]-S-phenylglycine t-Butyl Ester}, Gleevec, or fragments of Gleevec. These compounds were first tested in a cell-based assay and the effective concentrations of these compounds that blocked Abeta generation were quantitated. The mortality of zebrafish, as a result of exposure to different doses of compound, was assessed, and any apoptotic processes were examined by TUNEL staining. We then used conventional and automatic microscopes to acquire images of zebrafish and applied algorithms to automate image composition and processing. Zebrafish were treated in 96- or 384-well plates, and the phenotypes were analyzed at 2, 3 and 5 days post fertilization (dpf). We identified that AD95, a fragment of Gleevec, effectively blocks Abeta production and causes specific phenotypes that were different from those treated with DAPT. Finally, we validated the specificity of two Notch phenotypes (pigmentation and the curvature of tail/trunk) induced by DAPT in a dose-dependent manner. These phenotypes were examined in embryos treated with GSIs or AD95 at increasing concentrations. The expression levels of Notch target gene her6 were also measured by in situ hybridization and the co-relationship between the levels of Notch inhibition by DAPT and AD95 and the severity of phenotypes were determined.

conclusionThe results reported here of the effects on zebrafish suggest that this newly developed method may be used to screen novel GSIs and other leads for a variety of therapeutic indications.

Indexed as

AlgorithmsAmyloid beta-PeptidesAmyloid Precursor Protein SecretasesAnimalsBasic Helix-Loop-Helix ProteinsBenzamidesEmbryo, Nonmammaliangamma-Aminobutyric AcidHigh-Throughput Screening AssaysImatinib MesylateIn Situ HybridizationIn Situ Nick-End LabelingPhenotypePiperazinesProtein Kinase InhibitorsPyrimidines1,2-dilinolenoyl-3-(4-aminobutyryl)propane-1,2,3-triolAmyloid beta-PeptidesAmyloid Precursor Protein SecretasesBasic Helix-Loop-Helix ProteinsBenzamidesgamma-Aminobutyric AcidHer6 protein, zebrafishImatinib MesylatePiperazinesProtein Kinase InhibitorsPyrimidinesTriglyceridesZebrafish Proteins

Identifiers

PMID20307292
PMCPMC2851663
OpenAlexW1979039650

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.