Evidence map›Paper›PMID 20307190›Full record

ArticleDNA and cell biology2010

Biological variation among african trypanosomes: I. Clonal expression of virulence is not linked to the variant surface glycoprotein or the variant surface glycoprotein gene telomeric expression site.

Jill A Inverso, Timothy S Uphoff, Scott C Johnson, Donna M Paulnock, John M Mansfield

Open access · greenAbstract read
In one paragraph

Article in DNA and cell biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jill A InversoDepartment of Bacteriology, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
Timothy S Uphoff
Scott C Johnson
Donna M Paulnock
John M Mansfield
University of Wisconsin–Madison · US

Funding

MACROPHAGE ACTIVATION IN AFRICAN TRYPANOSOMIASISR01AI048242 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI PAULNOCK, DONNA M · 2002 to 2006
$1.6M
IMMUNOBIOLOGY OF AFRICAN TRYPANOSOMIASISR01AI022441 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI MANSFIELD, JOHN M. · 1985 to 2002
$1.0M
Modulation of innate immunity by microbial factorsR01AI051421 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI PAULNOCK, DONNA M · 2002 to 2006
$905k
BIOLOGICAL VARIATION AMONG AFRICAN TRYPANOSOMESR01AI039155 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI MANSFIELD, JOHN M. · 2000 to 2002
$773k
Novel Immunotherapy of African TrypanosomiasisR21AI073346 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI MANSFIELD, JOHN M. · 2008 to 2009
$404k
BIOLOGICAL VARIATION AMONG AFRICAN TRYPANOSOMESR21AI039155 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI MANSFIELD, JOHN M. · 1996 to 1996
–
NIAID NIH HHS AI-048242NIAID NIH HHS AI-051421NIAID NIH HHS AI-073346NIAID NIH HHS AI-22441NIAID NIH HHS AI-39155
6 · The paper itself

Abstract

The potential association of variant surface glycoprotein (VSG) gene expression with clonal expression of virulence in African trypanosomes was addressed. Two populations of clonally related trypanosomes, which differ dramatically in virulence for the infected host, but display the same apparent VSG surface coat phenotype, were characterized with respect to the VSG genes expressed as well as the chromosome telomeric expression sites (ES) utilized for VSG gene transcription. The VSG gene sequences expressed by clones LouTat 1 and LouTat 1A of Trypanosoma brucei rhodesiense were identical, and gene expression in both clones occurred precisely by the same gene conversion events (duplication and transposition), which generated an expression-linked copy (ELC) of the VSG gene. The ELC was present on the same genomic restriction fragments in both populations and resided in the telomere of a 330-kb chromosome; a single basic copy of the LouTat 1/1A VSG gene, present in all variants of the LouTat 1 serodeme, was located at an internal site of a 1.5-Mb chromosome. Restriction endonuclease mapping of the ES telomere revealed that the VSG ELC of clones LouTat 1 and 1A resides in the same site. Therefore, these findings provide evidence that the VSG gene ES and, potentially, any cotranscribed ES-associated genes do not play a role in the clonal regulation of virulence because trypanosome clones LouTat 1 and 1A, which differ markedly in their virulence properties, both express identical VSG genes from the same chromosome telomeric ES.

Indexed as

Genes, ProtozoanAmino Acid SequenceAnimalsBase SequenceMiceMolecular Sequence DataTelomereTrypanosoma brucei rhodesienseVariant Surface Glycoproteins, TrypanosomaVariant Surface Glycoproteins, Trypanosoma

Identifiers

PMID20307190
PMCPMC2936953
OpenAlexW2084321992

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.