Evidence map›Paper›PMID 20307070›Full record

ArticleBiochemistry2010

Regulation of phenylalanine hydroxylase: conformational changes upon phenylalanine binding detected by hydrogen/deuterium exchange and mass spectrometry.

Jun Li, Lawrence J Dangott, Paul F Fitzpatrick

Abstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 43 citations in OpenAlex.

  1. Nutrient sensors and their crosstalk.Experimental & molecular medicine · 2023
    Review
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  8. Gene Therapy for the Treatment of Neurological Disorders: Metabolic Disorders.Methods in molecular biology (Clifton, N.J.) · 2016
    Review
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  19. Boosting serotonin in the brain: is it time to revamp the treatment of depression?Journal of psychopharmacology (Oxford, England) · 2012
    Article
  20. Allosteric regulation of phenylalanine hydroxylase.Archives of biochemistry and biophysics · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Jun LiDepartment of Biochemistry and Biophysics, Texas A&M University, College Station,Texas 77843-2128, USA.
Lawrence J Dangott
Paul F Fitzpatrick
Laboratoire de Chimie · FRThe University of Texas Health Science Center at San Antonio · US

Funding

NEUROTRANSMITTER BIOSYNTHESISR01GM047291 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI FITZPATRICK, PAUL F. · 1992 to 2011
$3.2M
NIGMS NIH HHS R01 GM047291NIGMS NIH HHS R01GM47291
6 · The paper itself

Abstract

Phenylalanine acts as an allosteric activator of the tetrahydropterin-dependent enzyme phenylalanine hydroxylase. Hydrogen/deuterium exchange monitored by mass spectrometry has been used to gain insight into local conformational changes accompanying activation of rat phenylalanine hydroxylase by phenylalanine. Peptides in the regulatory and catalytic domains that lie in the interface between these two domains show large increases in the extent of deuterium incorporation from solvent in the presence of phenylalanine. In contrast, the effects of phenylalanine on the exchange kinetics of a mutant enzyme lacking the regulatory domain are limited to peptides surrounding the binding site for the amino acid substrate. These results support a model in which the N-terminus of the protein acts as an inhibitory peptide, with phenylalanine binding causing a conformational change in the regulatory domain that alters the interaction between the catalytic and regulatory domains.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCatalytic DomainDeuteriumHydrogenKineticsMass SpectrometryModels, MolecularMolecular Sequence DataPhenylalaninePhenylalanine HydroxylaseProtein ConformationRatsDeuteriumHydrogenPhenylalaninePhenylalanine Hydroxylase

Identifiers

PMID20307070
PMCPMC2855537
OpenAlexW1986751844

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.