Evidence map›Paper›PMID 20305652›Full record

ArticleNature methods2010

Direct determination of molecular haplotypes by chromosome microdissection.

Li Ma, Yan Xiao, Hui Huang, Qingwei Wang, Weinian Rao, Yue Feng, Kui Zhang, Qing Song

Abstract read
In one paragraph

Article in Nature methods, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Phased Genome Assemblies.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Recent Advances in Experimental Whole Genome Haplotyping Methods.International journal of molecular sciences · 2017
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. References for Haplotype Imputation in the Big Data Era.Molecular biology (Los Angeles, Calif.) · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Li MaCardiovascular Research Institute, Morehouse School of Medicine, Atlanta, Georgia, USA.
Yan Xiao
Hui Huang
Qingwei Wang
Weinian Rao
Yue Feng
Kui Zhang
Qing Song

Funding

TRANSCRIPTION FACTORS AND PROSTATE CANCERG12RR003034 · NCRR · MOREHOUSE SCHOOL OF MEDICINE · PI ZHAO, XUEYING · 1986 to 2011
$32.4M
VITAMIN D DEFICIENCY AND INCREASED RISK OF UTERINE FIBROIDS IN AFRICAN AMERICANSG12RR003032 · NCRR · MEHARRY MEDICAL COLLEGE · PI HOLT, ROBERT G · 1985 to 2011
$27.4M
Vascular Cell Apoptosis: Mediator Role of Transforming Growth Factor-beta-1S06GM008248 · NIGMS · MOREHOUSE SCHOOL OF MEDICINE · PI HARRIS-HOOKER, SANDRA · 1989 to 2009
$19.8M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
Morehouse School of Medicine Center of Clinical Research ExcellenceU54RR022814 · NCRR · MOREHOUSE SCHOOL OF MEDICINE · PI GIBBONS, GARY H · 2005 to 2009
$5.8M
ENHANCEMENT OF CARDIOVASCULAR AND RELATED RESEARCH AREASUH1HL003676 · NHLBI · MOREHOUSE SCHOOL OF MEDICINE · PI GIBBONS, GARY HUGH · 1996 to 2004
$5.3M
RECRUITMENT COREU54RR014758 · NCRR · MOREHOUSE SCHOOL OF MEDICINE · PI LAPU-BULA, RIGOBERT · 1999 to 2004
$4.2M
MSM Cardiovascular Center of ExcellenceR25HL003676 · NHLBI · MOREHOUSE SCHOOL OF MEDICINE · PI GIBBONS, GARY H · 2005 to 2009
$3.7M
Genetics of Early Onset-StrokeR01NS045012 · NINDS · UNIVERSITY OF MARYLAND BALTIMORE · PI KITTNER, STEVEN J · 2003 to 2007
$3.3M
MSM Training Program in Cardiovascular SciencesT32HL067702 · NHLBI · MOREHOUSE SCHOOL OF MEDICINE · PI GIBBONS, GARY H · 2001 to 2010
$2.4M
Genetic Risk to Stroke in Smokers and Nonsmokers in Two Ethnic GroupsU01HG004436 · NHGRI · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D · 2008 to 2009
$1.1M
Haplotype Analysis in Linkage Disequilibrium MappingR01GM074913 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ZHANG, KUI · 2006 to 2010
$1.1M
NCRR NIH HHS G12 RR003032NCRR NIH HHS G12 RR003034NCRR NIH HHS RR003034NCRR NIH HHS RR014758NCRR NIH HHS U54 RR014758NCRR NIH HHS U54 RR022814NHGRI NIH HHS HG004436NHGRI NIH HHS R21 HG006173NHGRI NIH HHS U01 HG004436NHLBI NIH HHS HL003676NHLBI NIH HHS R25 HL003676NHLBI NIH HHS SC2 HL095098NHLBI NIH HHS T32 HL067702NHLBI NIH HHS UH1 HL003676NIDDK NIH HHS P30 DK072488NIGMS NIH HHS GM074913NIGMS NIH HHS R01 GM074913NIGMS NIH HHS S06 GM008248NINDS NIH HHS NS45012NINDS NIH HHS R01 NS045012
6 · The paper itself

Abstract

Direct observation of haplotypes is still technically challenging. Here we report a method for the determination of haplotypes through chromosome microdissection. We determined human long-range chromosomal haplotypes with more than 98.85% accuracy at 24,245 genome-wide heterozygous single-nucleotide polymorphism (SNP) loci.

Indexed as

Genome, HumanHaplotypesChromosome MappingFemaleHumansMaleMicrodissectionPolymorphism, Single Nucleotide

Identifiers

PMID20305652
PMCPMC2871314

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.