Evidence map›Paper›PMID 20303857›Full record

ArticleBiophysical journal2010

Antiport mechanism for Cl(-)/H(+) in ClC-ec1 from normal-mode analysis.

Gennady V Miloshevsky, Ahmed Hassanein, Peter C Jordan

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Chloride Ion Transport by theFrontiers in chemistry · 2018
    Article
  5. Article
  6. The Origin of Coupled Chloride and Proton Transport in a ClJournal of the American Chemical Society · 2016
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Water access points and hydration pathways in CLC H+/Cl- transporters.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Gennady V MiloshevskySchool of Nuclear Engineering, Purdue University, West Lafayette, Indiana, USA.
Ahmed Hassanein
Peter C Jordan
Purdue University West Lafayette · USBrandeis University · US

Funding

Modeling of Ion PoresR01GM028643 · NIGMS · BRANDEIS UNIVERSITY · PI JORDAN, PETER C · 1985 to 2007
$2.4M
NIGMS NIH HHS GM-28643NIGMS NIH HHS R01 GM028643
6 · The paper itself

Abstract

ClC chloride channels and transporters play major roles in cellular excitability, epithelial salt transport, volume, pH, and blood pressure regulation. One family member, ClC-ec1 from Escherichia coli, has been structurally resolved crystallographically and subjected to intensive mutagenetic, crystallographic, and electrophysiological studies. It functions as a Cl(-)/H(+) antiporter, not a Cl(-) channel; however, the molecular mechanism for Cl(-)/H(+) exchange is largely unknown. Using all-atom normal-mode analysis to explore possible mechanisms for this antiport, we propose that Cl(-)/H(+) exchange involves a conformational cycle of alternating exposure of Cl(-) and H(+) binding sites of both ClC pores to the two sides of the membrane. Both pores switch simultaneously from facing outward to facing inward, reminiscent of the standard alternating-access mechanism, which may have direct implications for eukaryotic Cl(-)/H(+) transporters and Cl(-) channels.

Indexed as

Models, ChemicalModels, MolecularChloride ChannelsComputer SimulationChloride Channels

Identifiers

PMID20303857
PMCPMC2849085
OpenAlexW2048619729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.