Evidence map›Paper›PMID 20303767›Full record

ArticleBioorganic & medicinal chemistry2010

Assessing the trypanocidal potential of natural and semi-synthetic diketopiperazines from two deep water marine-derived fungi.

Katharine R Watts, Joseline Ratnam, Kean-Hooi Ang, Karen Tenney, Jennifer E Compton, James McKerrow, Phillip Crews

Open access · greenAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 64 citations in OpenAlex.

  1. Review
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  5. Article
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  7. Antiparasitic Activities of Compounds Isolated fromAntibiotics (Basel, Switzerland) · 2023
    Article
  8. Article
  9. Review
  10. Review
  11. Metabolites fromJournal of fungi (Basel, Switzerland) · 2020
    Review
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  13. Article
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  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Katharine R WattsDepartment of Chemistry and Biochemistry, University of California Santa Cruz, Santa Cruz, CA 95064, USA.
Joseline Ratnam
Kean-Hooi Ang
Karen Tenney
Jennifer E Compton
James McKerrow
Phillip Crews
University of California, Santa Cruz · USUniversity of California, San Francisco · US

Funding

Targeted Discovery of Marine-derived Anticancer LeadsU19CA052955 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI WRIGHT, AMY ELIZABETH · 1995 to 2009
$9.7M
NOVEL CYTOTOXIC NATURAL PRODUCTS FROM MARINE SPONGESR01CA047135 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI CREWS, PHIL, VALERIOTE, FREDERICK AUGUSTUS · 1989 to 2017
$8.1M
THERMO ELECTRON LTQ-FT MASS SPECTROMETERS10RR020939 · NCRR · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI HOLMAN, THEODORE R · 2006 to 2006
$368k
ACQUISITION OF A VARIAN 600 MHZ HIGH-RESOLUTION NMR: CANCERS10RR019918 · NCRR · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI CREWS, PHIL · 2004 to 2004
$272k
NCI NIH HHS R01 CA047135NCI NIH HHS U19 CA052955NCRR NIH HHS S10 RR019918NCRR NIH HHS S10 RR020939NCRR NIH HHS S10-RR19918NCRR NIH HHS S10-RR20939
6 · The paper itself

Abstract

Human African trypanosomiasis (HAT, commonly known as African sleeping sickness) is categorized as a neglected disease, as it afflicts >50,000 people annually in sub-saharan Africa, and there are few formal programs in the world focused on drug discovery approaches for this disease. In this study, we examined the crude extracts of two fungal strains (Aspergillus fumigatus and Nectria inventa) isolated from deep water sediment which provided >99% growth inhibition at 1microg/mL of Trypanosoma brucei, the causative parasite of HAT. A collection of fifteen natural products was supplemented with six semi-synthetic derivatives and one commercially available compound. Twelve of the compounds, each containing a diketopiperazine core, showed excellent activity against T. brucei (IC(50)=0.002-40microM), with selectivity over mammalian cells as great as 20-fold. The trypanocidal diketopiperazines were also tested against two cysteine protease targets Rhodesain and TbCatB, where five compounds showed inhibition activity at concentrations less than 20microM. A preliminary activity pattern is described and analyzed.

Indexed as

AcetylationAnimalsAspergillus fumigatusCysteine EndopeptidasesCysteine Proteinase InhibitorsDiketopiperazinesDrug Evaluation, PreclinicalFungiGeologic SedimentsHumansIndicators and ReagentsJurkat CellsMagnetic Resonance SpectroscopyMethylationPiperazinesSpiro CompoundsCysteine EndopeptidasesCysteine Proteinase InhibitorsDiketopiperazinesIndicators and ReagentsPiperazinesrhodesainSpiro Compoundsspirotryprostatin ATbcatB protein, Trypanosoma bruceiTrypanocidal Agents

Identifiers

PMID20303767
PMCPMC2893881
OpenAlexW2063107075

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.