Evidence map›Paper›PMID 20300977›Full record

ArticleMedical oncology (Northwood, London, England)2011

Pathobiologic implications of methylation and expression status of Runx3 and CHFR genes in gastric cancer.

Shi-Lian Hu, Da-Bing Huang, Yu-Bei Sun, Lei Wu, Wei-Ping Xu, Shi Yin, Jiong Chen, Xiao-Dong Jiang, Gan Shen

Abstract read
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In one paragraph

Article in Medical oncology (Northwood, London, England), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Association betweenOncoTargets and therapy · 2016
    Article
  7. Article
  8. Role of E3 ubiquitin ligases in gastric cancer.World journal of gastroenterology · 2015
    Review
  9. Pathogenetic mechanisms in gastric cancer.World journal of gastroenterology · 2014
    Review
  10. Article
  11. CHFR: a key checkpoint component implicated in a wide range of cancers.Cellular and molecular life sciences : CMLS · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Shi-Lian HuCentre for the study of Gastric Cancer, Anhui Provincial Hospital, Anhui Medical University, Hefei, People's Republic of China. prof.hushilian@gmail.com
Da-Bing Huang
Yu-Bei Sun
Lei Wu
Wei-Ping Xu
Shi Yin
Jiong Chen
Xiao-Dong Jiang
Gan Shen
Anhui Provincial Hospital · CNAnhui Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Runx3 and CHFR genes were defined as tumor suppressor genes in gastric cancer (GC) recently. This paper was to investigate the roles of methylation and expression status of Runx3 and CHFR genes in GC patients. Methylation-specific polymerase chain reaction (MSP) and bisulfite DNA sequencing (BSP) were used to detect methylation status of Runx3 and CHFR genes in GC patients. The expression of Runx3 and CHFR in GC patients was analyzed by reverse transcription polymerase chain reaction (RT-PCR) and immunohistochemical analysis. The expression of the protein and mRNA decreased remarkably in the patients with aberrant promoter methylation of Runx3 and CHFR genes. The methylation status of Runx3 and CHFR were inversely related to the tumor size, tumor invasion depth and tumor differentiation in GC patients. Moreover, the protein expression of Runx3 and CHFR were significantly correlated with tumor invasion depth and tumor differentiation, respectively. Aberrant promoter methylation of Runx3 and CHFR genes may be involved in the carcinogenesis and development of GC and may provide useful clues for the prediction of the malignant behaviors of GC.

Indexed as

Cell Cycle ProteinsCore Binding Factor Alpha 3 SubunitDNA MethylationFemaleGene ExpressionGene Expression ProfilingHumansImmunohistochemistryMaleMiddle AgedNeoplasm ProteinsNeoplasm StagingPoly-ADP-Ribose Binding ProteinsPromoter Regions, GeneticReverse Transcriptase Polymerase Chain ReactionRNA, MessengerCell Cycle ProteinsCHFR protein, humanCore Binding Factor Alpha 3 SubunitNeoplasm ProteinsPoly-ADP-Ribose Binding ProteinsRNA, MessengerRunx3 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID20300977
OpenAlexW2004159946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.