Evidence map›Paper›PMID 20297785›Full record

ArticleThe Journal of organic chemistry2010

Azide-tetrazole equilibrium of C-6 azidopurine nucleosides and their ligation reactions with alkynes.

Mahesh K Lakshman, Manish K Singh, Damon Parrish, Raghavan Balachandran, Billy W Day

Abstract read
In one paragraph

Article in The Journal of organic chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Nitrogen-Centered Radicals Derived from Azidonucleosides.Molecules (Basel, Switzerland) · 2024
    Review
  5. Article
  6. Scope of tetrazolo[1,5-Beilstein journal of organic chemistry · 2022
    Article
  7. Novel Bis- and Mono-Pyrrolo[2,3-Molecules (Basel, Switzerland) · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. The "Speedy" Synthesis of Atom-Specific (15)N Imino/Amido-Labeled RNA.Chemistry (Weinheim an der Bergstrasse, Germany) · 2015
    Article
  16. Article
  17. Review
  18. Synthesis of deuterated 1,2,3-triazoles.The Journal of organic chemistry · 2012
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mahesh K LakshmanDepartment of Chemistry, The City College and The City University of New York, 160 Convent Avenue, New York, New York 10031, USA. lakshman@sci.ccny.cuny.edu
Manish K Singh
Damon Parrish
Raghavan Balachandran
Billy W Day

Funding

TNC FUNCTION IN APOPTOTIC ANTIGEN DRIVEN AUTOIMMUNITYG12RR003060 · NCRR · CITY COLLEGE OF NEW YORK · PI STEINBERG, MARK L · 1985 to 2011
$26.1M
IMS/MS DETECTION OF ILLICIT DRUGS IN BIOLOGICAL SAMPLESF31DA006005 · NIDA · WASHINGTON STATE UNIVERSITY · PI MARKOWSKI-MATZ, LAURA E · 2000 to 2001
$39k
NCRR NIH HHS G12 RR003060NCRR NIH HHS G12 RR03060NIDA NIH HHS F31 DA006005NIDA NIH HHS Y1 DA6005
6 · The paper itself

Abstract

Facile syntheses of C-6 azidopurine ribonucleosides and 2'-deoxyribonucleosides have been developed. For silyl- and acetyl-protected as well as unprotected nucleosides, access to the azido derivatives could be readily attained via displacement of BtO(-) from the O(6)-(benzotriazol-1-yl)inosine nucleosides by azide anion. Use of diphenylphosphoryl azide/DBU as a simple route to the acetyl-protected azido nucleosides was also evaluated, but this proved to be inferior. Since these azido nucleosides can exist in an azide.tetrazole equilibrium, the effect of solvent polarity on this equilibrium was investigated. Subsequently, a detailed analysis of Cu-mediated azide-alkyne ("click") ligation was undertaken. Biphasic CH(2)Cl(2)/H(2)O medium proved to be best for the ligation reactions, suppressing the undesired azide reduction that was competing. Interestingly, although the tetrazolyl isomer predominates (ca. 80%) in CD(2)Cl(2) and in CD(2)Cl(2)/D(2)O, the Cu-catalyzed click reactions proceed smoothly with the silyl-protected ribo- and 2'-deoxyribonucleosides, leading to the C-6 triazolyl products in good to excellent yields. Thus, depletion of the azido form from the reaction mixture shifts the azide.tetrazole equilibrium, eventually resulting in complete consumption of azide and tetrazole. In several cases, major and minor azide-alkyne ligation products were observed, and characterization data are provided for both. In order to confirm the regiochemistry leading to the major isomer, one product was crystallized and evaluated by X-ray crystallography. The Cu-catalyzed azide-alkyne ligation is clearly efficient and significantly superior to thermal reactions, which were slow. Biological evaluation showed low cytotoxicities for the agents, suggesting their usefulness as biological probes.

Indexed as

AlkynesAzidesCatalysisCopperPurine NucleosidesSolutionsTetrazolesAlkynesAzidesCopperPurine NucleosidesSolutionsTetrazoles

Identifiers

PMID20297785
PMCPMC2877261

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.