Evidence map›Paper›PMID 20236539›Full record

ArticleBMC microbiology2010

First insights into the genetic diversity of Mycobacterium tuberculosis isolates from HIV-infected Mexican patients and mutations causing multidrug resistance.

Rocio Lopez-Alvarez, Claudia Badillo-Lopez, Jorge F Cerna-Cortes, Ivan Castillo-Ramirez, Sandra Rivera-Gutierrez, Addy C Helguera-Repetto, Diana Aguilar, Rogelio Hernandez-Pando, Sofia Samper, Jorge A Gonzalez-y-Merchand

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 32 citations in OpenAlex.

  1. Molecular Epidemiology ofMicroorganisms · 2025
    Review
  2. Frontiers in microbiology · 2025
    Article
  3. Genetic Diversity ofPathogens (Basel, Switzerland) · 2024
    Article
  4. Phenotypic and Genotypic Drug Resistance ofPathogens (Basel, Switzerland) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Rocio Lopez-AlvarezDepartamento de Microbiologia, ENCB-IPN, Mexico City, Mexico.
Claudia Badillo-Lopez
Jorge F Cerna-Cortes
Ivan Castillo-Ramirez
Sandra Rivera-Gutierrez
Addy C Helguera-Repetto
Diana Aguilar
Rogelio Hernandez-Pando
Sofia Samper
Jorge A Gonzalez-y-Merchand
Instituto Politécnico Nacional · MXInstituto Nacional de Ciencias Médicas y Nutrición Salvador Zubirán · MXCentro de Investigación Biomédica en Red · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe prevalence of infections with Mycobacterium tuberculosis (MTb) and nontuberculous mycobacteria (NTM) species in HIV-infected patients in Mexico is unknown. The aims of this study were to determine the frequency of MTb and NTM species in HIV-infected patients from Mexico City, to evaluate the genotypic diversity of the Mycobacterium tuberculosis complex strains, to determine their drug resistance profiles by colorimetric microplate Alamar Blue assay (MABA), and finally, to detect mutations present in katG, rpoB and inhA genes, resulting in isoniazid (INH) and rifampin (RIF) resistance.

resultsOf the 67 mycobacterial strains isolated, 48 were identified as MTb, 9 as M. bovis, 9 as M. avium and 1 as M. intracellulare. IS6110-RFLP of 48 MTb strains showed 27 profiles. Spoligotyping of the 48 MTb strains yielded 21 patterns, and 9 M. bovis strains produced 7 patterns. Eleven new spoligotypes patterns were found. A total of 40 patterns were produced from the 48 MTb strains when MIRU-VNTR was performed. Nineteen (39.6%) MTb strains were resistant to one or more drugs. One (2.1%) multidrug-resistant (MDR) strain was identified. A novel mutation was identified in a RIF-resistant strain, GAG --> TCG (Glu --> Ser) at codon 469 of rpoB gene.

conclusionsThis is the first molecular analysis of mycobacteria isolated from HIV-infected patients in Mexico, which describe the prevalence of different mycobacterial species in this population. A high genetic diversity of MTb strains was identified. New spoligotypes and MIRU-VNTR patterns as well as a novel mutation associated to RIF-resistance were found. This information will facilitate the tracking of different mycobacterial species in HIV-infected individuals, and monitoring the spread of these microorganisms, leading to more appropriate measures for tuberculosis control.

Indexed as

MutationAIDS-Related Opportunistic InfectionsCluster AnalysisDrug Resistance, Multiple, BacterialHIV InfectionsHumansMexicoMycobacterium tuberculosisPolymorphism, Restriction Fragment LengthSerotypingTuberculosis, Multidrug-Resistant

Identifiers

PMID20236539
PMCPMC2848023
OpenAlexW2096081125

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.