ArticleMolecular breeding : new strategies in plant improvement2010
Extension of the core map of common bean with EST-SSR, RGA, AFLP, and putative functional markers.
Article in Molecular breeding : new strategies in plant improvement, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- Marker association study of yield attributing traits in common bean (Phaseolus vulgaris L.).Molecular biology reports · 2020Article
- Marker-Trait Association Analysis of Seed Traits in Accessions of Common Bean (Frontiers in genetics · 2020Article
- Diversification and genetic structure of the western-to-eastern progression of European Phaseolus vulgaris L. germplasm.BMC plant biology · 2019Article
- Evidence for Strong Kinship Influence on the Extent of Linkage Disequilibrium in Cultivated Common Beans.Genes · 2018Article
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- Genome-Wide Association Studies of Anthracnose and Angular Leaf Spot Resistance in Common Bean (Phaseolus vulgaris L.).PloS one · 2016Article
- Unraveling the efficiency of RAPD and SSR markers in diversity analysis and population structure estimation in common bean.Saudi journal of biological sciences · 2016Article
- SNP Assay Development for Linkage Map Construction, Anchoring Whole-Genome Sequence, and Other Genetic and Genomic Applications in Common Bean.G3 (Bethesda, Md.) · 2015Article
- Developing a common bean core collection suitable for association mapping studies.Genetics and molecular biology · 2015Article
- Analysis of BAC-end sequences in common bean (Phaseolus vulgaris L.) towards the development and characterization of long motifs SSRs.Plant molecular biology · 2014Article
- BAC-end microsatellites from intra and inter-genic regions of the common bean genome and their correlation with cytogenetic features.PloS one · 2014Article
- Increasing the density of markers around a major QTL controlling resistance to angular leaf spot in common bean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013Article
- Genetic mapping of two genes conferring resistance to powdery mildew in common bean (Phaseolus vulgaris L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013Article
- First use of microsatellite markers in a large collection of cultivated and wild accessions of tepary bean (Phaseolus acutifolius A. Gray).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2012Article
- Marker-based linkage map of Andean common bean (Phaseolus vulgaris L.) and mapping of QTLs underlying popping ability traits.BMC plant biology · 2012Article
- A novel linkage map of sugarcane with evidence for clustering of retrotransposon-based markers.BMC genetics · 2012Article
- Dissecting Phaseolus vulgaris innate immune system against Colletotrichum lindemuthianum infection.PloS one · 2012Article
- The characterization of a new set of EST-derived simple sequence repeat (SSR) markers as a resource for the genetic analysis of Phaseolus vulgaris.BMC genetics · 2011Article
- Gene-based SSR markers for common bean (Phaseolus vulgaris L.) derived from root and leaf tissue ESTs: an integration of the BMc series.BMC plant biology · 2011Article
Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Microsatellites and gene-derived markers are still underrepresented in the core molecular linkage map of common bean compared to other types of markers. In order to increase the density of the core map, a set of new markers were developed and mapped onto the RIL population derived from the 'BAT93' x 'Jalo EEP558' cross. The EST-SSR markers were first characterized using a set of 24 bean inbred lines. On average, the polymorphism information content was 0.40 and the mean number of alleles per locus was 2.7. In addition, AFLP and RGA markers based on the NBS-profiling method were developed and a subset of the mapped RGA was sequenced. With the integration of 282 new markers into the common bean core map, we were able to place markers with putative known function in some existing gaps including regions with QTL for resistance to anthracnose and rust. The distribution of the markers over 11 linkage groups is discussed and a newer version of the common bean core linkage map is proposed.
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