Evidence map›Paper›PMID 20232320›Full record

ArticleJournal of cellular physiology2010

Transcriptional regulation of Rex1 (zfp42) in normal prostate epithelial cells and prostate cancer cells.

Mi-Young Lee, Ailan Lu, Lorraine J Gudas

Open access · greenAbstract read
In one paragraph

Article in Journal of cellular physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Embryonic stem cell markers.Molecules (Basel, Switzerland) · 2012
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mi-Young LeeDepartment of Pharmacology, Weill Cornell Medical College of Cornell University, New York, NY 10065, USA.
Ailan Lu
Lorraine J Gudas
Cornell University · US

Funding

Collaborative Program in Nutrition and Cancer Prevention (PNCP)R25CA105012 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CUNNINGHAM-RUNDLES, SUSANNA · 2006 to 2010
$2.3M
Metabolism of Vitamin A in the ProstateR01CA097543 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUDAS, LORRAINE J · 2005 to 2009
$1.4M
NCI NIH HHS R01 CA097543NCI NIH HHS R25 CA105012
6 · The paper itself

Abstract

Rex1 (zfp42) was identified by our laboratory because of its reduced expression in F9 teratocarcinoma stem cells after retinoic acid (RA) treatment. The Rex1 (Zfp42) gene is currently widely used as a marker of embryonic stem cells. We compared the transcriptional regulation of the human Rex1 gene in NTera-2 (NT-2) human teratocarcinoma, normal human prostate epithelial cells (PrEC), and prostate cancer cells (PC-3) by promoter/luciferase analyses. Oct4, Sox2, Nanog, and Dax1 transcripts are expressed at higher levels in NT-2 and PrEC cells than in PC-3 cells. Co-transfection analyses showed that YY1 and Rex1 are positive regulators of hRex1 transcription in NT-2 and PrEC cells, whereas Nanog is not. Serial deletion constructs of the hRex1 promoter were created and analyzed, by which we identified a potential negative regulatory site that is located between -1 and -0.4 kb of the hRex1 promoter. We also delineated regions of the hRex1 promoter between -0.4 kb and the TSS that, when mutated, reduced transcriptional activation; these are putative Rex1 binding sites. Mutation of a putative Rex1 binding site in electrophoretic mobility shift assays (EMSA) resulted in reduced protein binding. Taken together, our results indicate that hRex1 binds to the hRex1 promoter region at -298 bp and positively regulates hRex1 transcription, but that this regulation is lost in PC-3 human prostate cancer cells. This lack of positive transcriptional regulation by the hRex1 protein may be responsible for the lack of Rex1 expression in PC-3 prostate cancer cells.

Indexed as

Gene Expression Regulation, NeoplasticTranscriptional ActivationBase SequenceBinding SitesCell Line, TumorDAX-1 Orphan Nuclear ReceptorDown-RegulationEpithelial CellsHomeodomain ProteinsHumansKruppel-Like Transcription FactorsMaleMolecular Sequence DataMutationNanog Homeobox ProteinOctamer Transcription Factor-3DAX-1 Orphan Nuclear ReceptorHomeodomain ProteinsKruppel-Like Transcription FactorsNanog Homeobox ProteinNANOG protein, humanNR0B1 protein, humanOctamer Transcription Factor-3POU5F1 protein, humanRNA, MessengerSOX2 protein, humanSOXB1 Transcription FactorsYY1 protein, humanYY1 Transcription FactorZFP42 protein, human

Identifiers

PMID20232320
PMCPMC3306262
OpenAlexW2157412836

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.