Evidence map›Paper›PMID 20224725›Full record

ArticleInternational journal of clinical and experimental pathology2010

Molecular detection of B-cell neoplasms by specific DNA methylation biomarkers.

Michael X Wang, Huan-You Wang, Xiaohui Zhao, Nalluri Srilatha, Dali Zheng, Huidong Shi, Jie Ning, Deiter J Duff, Kristen H Taylor, Barbara A Gruner and 1 more

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in International journal of clinical and experimental pathology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Oncology letters · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Michael X WangDepartment of Pathology and Anatomical Sciences, University of Missouri School of Medicine, Columbia, MO, USA. wangmx@health.missouri.edu
Huan-You Wang
Xiaohui Zhao
Nalluri Srilatha
Dali Zheng
Huidong Shi
Jie Ning
Deiter J Duff
Kristen H Taylor
Barbara A Gruner
Charles W Caldwell
University of Missouri · US

Funding

Epigenetic Targeting in Non-Hodgkin's LymphomaR21CA123018 · NCI · UNIVERSITY OF MISSOURI-COLUMBIA · PI SHI, HUIDONG · 2006 to 2007
$365k
Integrated Genetic and Epigenetic Biomarkers for Molecular EpidemiologyR03CA123565 · NCI · UNIVERSITY OF MISSOURI-COLUMBIA · PI SHI, HUIDONG · 2007 to 2008
$150k
NCI NIH HHS R03 CA123565NCI NIH HHS R21 CA123018
6 · The paper itself

Abstract

A novel, easy to perform PCR-based method employing specific DNA methylation biomarkers to detect B-cell neoplasms in a variety of B-cell lines and B lymphoblastic leukemia (B-ALL) patient specimens has been developed. This method detects as few as 5 B-ALL cells, or 1 B-ALL cell in 1,000,000 normal background blood cells using a single marker, DLC-1 gene CpG island (CGI) methylation. By adding two additional markers PCDHGA12 and RPIB9, over 80% of B-ALL cases were detected in patients' bone marrow and/or peripheral blood specimens. We have traced clinical B-ALL cases up to 10 years retrospectively and the DLC-1 methylation is correlated with patient clinical status. Thus, this epigenetic-based molecular method demonstrates its potential use in the diagnosis of B-cell neoplasia, in addition to traditional approach such as clinical features, morphology, immunophenotype, and genetic analysis.

Indexed as

DNA MethylationAdolescentAdultAgedAged, 80 and overBiomarkers, TumorCarrier ProteinsCell Line, TumorChildChild, PreschoolDNA, NeoplasmFemaleGTPase-Activating ProteinsHumansIntracellular Signaling Peptides and ProteinsLeukemia, B-CellBiomarkers, TumorCarrier ProteinsDLC1 protein, humanDNA, NeoplasmGTPase-Activating ProteinsIntracellular Signaling Peptides and ProteinsNerve Tissue ProteinsRUNDC3B protein, humanTumor Suppressor ProteinsB lymphoblastic leukemiaDNA methylation biomarkerMature B-cell neoplasms

Identifiers

PMID20224725
PMCPMC2836504
OpenAlexW49371899

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.