Evidence map›Paper›PMID 20224646›Full record

ArticleJournal of biomedicine & biotechnology2010

The adenovirus type 3 dodecahedron's RGD loop comprises an HSPG binding site that influences integrin binding.

E Gout, G Schoehn, D Fenel, H Lortat-Jacob, P Fender

Open access · hybridAbstract read
In one paragraph

Article in Journal of biomedicine & biotechnology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  5. Tau Spreading Mechanisms; Implications for Dysfunctional Tauopathies.International journal of molecular sciences · 2018
    Review
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  8. Review
  9. Article
  10. Review
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  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

E GoutCNRS-Institut de Biologie Structurale, 41 rue Jules Horowitz, 38027 Grenoble, France.
G Schoehn
D Fenel
H Lortat-Jacob
P Fender
CEA Grenoble · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversité Joseph Fourier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human type 3 adenovirus dodecahedron (a virus like particle made of twelve penton bases) features the ability to enter cells through Heparan Sulphate Proteoglycans (HSPGs) and integrins interaction and is used as a versatile vector to deliver DNA or proteins. Cryo-EM reconstruction of the pseudoviral particle with Heparan Sulphate (HS) oligosaccharide shows an extradensity on the RGD loop. A set of mutants was designed to study the respective roles of the RGD sequence (RGE mutant) and of a basic sequence located just downstream. Results showed that the RGE mutant binding to the HS deficient CHO-2241 cells was abolished and unexpectedly, mutation of the basic sequence (KQKR to AQAS) dramatically decreased integrin recognition by the viral pseudoparticle. This basic sequence is thus involved in integrin docking, showing a close interplay between HSPGs and integrin receptors.

Indexed as

Adenoviruses, HumanAnimalsBinding SitesCHO CellsCricetinaeCricetulusHeparan Sulfate ProteoglycansIntegrinsMutagenesis, Site-DirectedOligopeptidesProtein BindingVirionarginyl-glycyl-aspartic acidHeparan Sulfate ProteoglycansIntegrinsOligopeptides

Identifiers

PMID20224646
PMCPMC2833306
OpenAlexW2001462144

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.