Evidence map›Paper›PMID 20218710›Full record

ArticleJournal of the American Chemical Society2010

New light on NO bonding in Fe(III) heme proteins from resonance Raman spectroscopy and DFT modeling.

Alexandra V Soldatova, Mohammed Ibrahim, John S Olson, Roman S Czernuszewicz, Thomas G Spiro

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Review
  3. Bio-Inspired Imprinting Materials for Biomedical Applications.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Review
  4. Article
  5. Article
  6. Structure and reactivity of chlorite dismutase nitrosyls.Journal of inorganic biochemistry · 2020
    Article
  7. Review
  8. Alternative modes of OJournal of inorganic biochemistry · 2020
    Article
  9. Discovery of a Nitric Oxide-Responsive Protein inMolecules (Basel, Switzerland) · 2019
    Article
  10. Article
  11. Mechanisms of HNO Reactions with Ferric Heme Proteins.Angewandte Chemie (International ed. in English) · 2018
    Article
  12. Article
  13. Comprehensive Fe-ligand vibration identification in {FeNO}6 hemes.Journal of the American Chemical Society · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. CO, NO and OCoordination chemistry reviews · 2013
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alexandra V SoldatovaDepartment of Chemistry, University of Washington, Box 351700, Seattle, Washington 98195, USA.
Mohammed Ibrahim
John S Olson
Roman S Czernuszewicz
Thomas G Spiro

Funding

HEME PROTEIN STRUCTURE AND DYNAMICSR01GM033576 · NIGMS · UNIVERSITY OF WASHINGTON · PI SPIRO, THOMAS G. · 1985 to 2010
$3.5M
Function Properties of Hemoglobins and MyoglobinsR01GM035649 · NIGMS · RICE UNIVERSITY · PI OLSON, JOHN S. · 1985 to 2010
$3.3M
DESIGN OF HEME-PROTEIN BASED BLOOD SUBSTITUTESR01HL047020 · NHLBI · RICE UNIVERSITY · PI OLSON, JOHN S. · 1991 to 2010
$2.9M
NHLBI NIH HHS HL047020NHLBI NIH HHS R01 HL047020NIGMS NIH HHS GM033576NIGMS NIH HHS GM035649NIGMS NIH HHS R01 GM033576NIGMS NIH HHS R01 GM035649
6 · The paper itself

Abstract

Visible and ultraviolet resonance Raman (RR) spectra are reported for Fe(III)(NO) adducts of myoglobin variants with altered polarity in the distal heme pockets. The stretching frequencies of the Fe(III)-NO and N-O bonds, nu(FeN) and nu(NO), are negatively correlated, consistent with backbonding. However, the correlation shifts to lower nu(NO) for variants lacking a distal histidine. DFT modeling reproduces the shifted correlations and shows the shift to be associated with the loss of a lone-pair donor interaction from the distal histidine that selectively strengthens the N-O bond. However, when the model contains strongly electron-withdrawing substituents at the heme beta-positions, nu(FeN) and nu(NO) become positively correlated. This effect results from Fe(III)-N-O bending, which is induced by lone-pair donation to the N(NO) atom. Other mechanisms for bending are discussed, which likewise lead to a positive nu(FeN)/nu(NO) correlation, including thiolate ligation in heme proteins and electron-donating meso-substituents in heme models. The nu(FeN)/nu(NO) data for the Fe(III) complexes are reporters of heme pocket polarity and the accessibility of lone pair, Lewis base donors. Implications for biologically important processes, including NO binding, reductive nitrosylation, and NO reduction, are discussed.

Indexed as

Computer SimulationModels, ChemicalFerric CompoundsMolecular StructureMyoglobinNitric OxideQuantum TheorySpectrum Analysis, RamanFerric CompoundsMyoglobinNitric Oxide

Identifiers

PMID20218710
PMCPMC2853766

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.