Evidence map›Paper›PMID 20217243›Full record

ArticleMolecular biology reports2010

Identification of Fe-excess-induced genes in rice shoots reveals a WRKY transcription factor responsive to Fe, drought and senescence.

Felipe Klein Ricachenevsky, Raul Antonio Sperotto, Paloma Koprovski Menguer, Janette Palma Fett

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Article in Molecular biology reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 97 citations in OpenAlex.

  1. Review
  2. Review
  3. Horticulture research · 2025
    Article
  4. WRKY Transcription Factors in Response to Metal Stress in Plants: A Review.International journal of molecular sciences · 2024
    Review
  5. Review
  6. Article
  7. Overexpression ofInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Frontiers in plant science · 2022
    Article
  10. Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2021
    Article
  11. Current Understanding of Leaf Senescence in Rice.International journal of molecular sciences · 2021
    Review
  12. Article
  13. Article
  14. Genome-Wide Identification of WheatFrontiers in plant science · 2021
    Article
  15. Elucidation of NovelFrontiers in plant science · 2021
    Article
  16. Iron deficiency triggered transcriptome changes in bread wheat.Computational and structural biotechnology journal · 2020
    Article
  17. Review
  18. Plants (Basel, Switzerland) · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Felipe Klein RicachenevskyCentro de Biotecnologia, Universidade Federal do Rio Grande do Sul, P.O. Box 15005, Porto Alegre, RS, 91501-970, Brazil.
Raul Antonio Sperotto
Paloma Koprovski Menguer
Janette Palma Fett
Universidade Federal do Rio Grande do Sul · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fe participates in several important reactions in plant metabolism. However, Fe homeostasis in plants is not completely understood, and molecular studies on Fe-excess stress are scarce. Rice (Oryza sativa L. ssp. indica) is largely cultivated in submerged conditions, where the extremely reductive environment can lead to severe Fe overload. In this work, we used representational difference analysis (RDA) to isolate sequences up-regulated in rice shoots after exposure to Fe-excess. We isolated 24 sequences which have putative functions in distinct cellular processes, such as transcription regulation (OsWRKY80), stress response (OsGAP1, DEAD-BOX RNA helicase), proteolysis (oryzain-α, rhomboid protein), photosynthesis (chlorophyll a/b binding protein), sugar metabolism (β glucosidase) and electron transport (NADH ubiquinone oxireductase). We show that the putative WRKY transcription factor OsWRKY80 is up-regulated in rice leaves, stems and roots after Fe-excess treatment. This up-regulation is also observed after dark-induced senescence and drought stress, indicating that OsWRKY80 could be a general stress-responsive gene. To our knowledge, this is the first report of an Fe-excess-induced transcription factor in plants.

Indexed as

DroughtsDarknessDNA, ComplementaryGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantIronOrgan SpecificityOryzaPlant ProteinsPlant ShootsReverse Transcriptase Polymerase Chain ReactionRNA, MessengerStress, PhysiologicalTranscription FactorsUp-RegulationDNA, ComplementaryIronPlant ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID20217243
OpenAlexW2093329898

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.